Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | N175_RS09675 | Genome accession | NC_022223 |
| Coordinates | 2113549..2113848 (-) | Length | 99 a.a. |
| NCBI ID | WP_017047776.1 | Uniprot ID | A0A1Y0NUT1 |
| Organism | Vibrio anguillarum M3 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2108549..2118848
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N175_RS09650 (N175_09930) | lapB | 2108964..2110133 (-) | 1170 | WP_026028046.1 | lipopolysaccharide assembly protein LapB | - |
| N175_RS09655 (N175_09935) | - | 2110153..2110428 (-) | 276 | WP_013857177.1 | LapA family protein | - |
| N175_RS09660 (N175_09940) | ihfB | 2110570..2110854 (-) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| N175_RS09665 (N175_09945) | rpsA | 2110931..2112601 (-) | 1671 | WP_013857179.1 | 30S ribosomal protein S1 | - |
| N175_RS09670 (N175_09950) | cmk | 2112705..2113385 (-) | 681 | WP_013857180.1 | (d)CMP kinase | - |
| N175_RS09675 (N175_09955) | comEA | 2113549..2113848 (-) | 300 | WP_017047776.1 | ComEA family DNA-binding protein | Machinery gene |
| N175_RS09680 (N175_09960) | ppiD | 2113985..2115850 (-) | 1866 | WP_013857182.1 | peptidylprolyl isomerase | - |
| N175_RS09685 (N175_09965) | - | 2116008..2116280 (-) | 273 | WP_026027116.1 | HU family DNA-binding protein | - |
| N175_RS09690 (N175_09970) | lon | 2116476..2118827 (-) | 2352 | WP_013857184.1 | endopeptidase La | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10804.74 Da Isoelectric Point: 9.6909
>NTDB_id=61367 N175_RS09675 WP_017047776.1 2113549..2113848(-) (comEA) [Vibrio anguillarum M3]
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=61367 N175_RS09675 WP_017047776.1 2113549..2113848(-) (comEA) [Vibrio anguillarum M3]
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
59.223 |
100 |
0.616 |
| comEA | Vibrio cholerae strain A1552 |
59.223 |
100 |
0.616 |
| comEA | Vibrio campbellii strain DS40M4 |
58.163 |
98.99 |
0.576 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
58.889 |
90.909 |
0.535 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.444 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40 |
100 |
0.444 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |