Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | LEO81_RS04230 | Genome accession | NZ_CP084351 |
| Coordinates | 867619..867939 (-) | Length | 106 a.a. |
| NCBI ID | WP_005309580.1 | Uniprot ID | K1K148 |
| Organism | Aeromonas dhakensis strain 71431 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 862619..872939
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LEO81_RS04210 (LEO81_04210) | - | 862918..863601 (-) | 684 | WP_226014296.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| LEO81_RS04215 (LEO81_04215) | - | 863957..864928 (+) | 972 | WP_226014297.1 | response regulator | - |
| LEO81_RS04220 (LEO81_04220) | - | 865001..866398 (-) | 1398 | WP_026459194.1 | peptide MFS transporter | - |
| LEO81_RS04225 (LEO81_04225) | galU | 866612..867523 (-) | 912 | WP_226014298.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| LEO81_RS04230 (LEO81_04230) | comEA | 867619..867939 (-) | 321 | WP_005309580.1 | ComEA family DNA-binding protein | Machinery gene |
| LEO81_RS04235 (LEO81_04235) | cysQ | 868106..868876 (+) | 771 | WP_226014299.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| LEO81_RS04240 (LEO81_04240) | - | 868954..869250 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| LEO81_RS04245 (LEO81_04245) | - | 869275..869838 (-) | 564 | WP_005309592.1 | septation protein A | - |
| LEO81_RS04250 (LEO81_04250) | - | 869943..871448 (-) | 1506 | WP_226014300.1 | pyridoxal-dependent decarboxylase | - |
| LEO81_RS04255 (LEO81_04255) | - | 871666..872301 (+) | 636 | WP_010636289.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=610753 LEO81_RS04230 WP_005309580.1 867619..867939(-) (comEA) [Aeromonas dhakensis strain 71431]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=610753 LEO81_RS04230 WP_005309580.1 867619..867939(-) (comEA) [Aeromonas dhakensis strain 71431]
ATGAACTACAAGACCCTGACCGCCACCTTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCTTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |