Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | LEO73_RS04210 | Genome accession | NZ_CP084349 |
| Coordinates | 860012..860332 (-) | Length | 106 a.a. |
| NCBI ID | WP_005309580.1 | Uniprot ID | K1K148 |
| Organism | Aeromonas dhakensis strain 71453 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 855012..865332
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LEO73_RS04190 (LEO73_04190) | - | 855317..855994 (-) | 678 | WP_226009395.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| LEO73_RS04195 (LEO73_04195) | - | 856350..857321 (+) | 972 | WP_005309570.1 | response regulator | - |
| LEO73_RS04200 (LEO73_04200) | - | 857394..858791 (-) | 1398 | WP_026459194.1 | peptide MFS transporter | - |
| LEO73_RS04205 (LEO73_04205) | galU | 859005..859916 (-) | 912 | WP_095593384.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| LEO73_RS04210 (LEO73_04210) | comEA | 860012..860332 (-) | 321 | WP_005309580.1 | ComEA family DNA-binding protein | Machinery gene |
| LEO73_RS04215 (LEO73_04215) | cysQ | 860499..861269 (+) | 771 | WP_226009396.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| LEO73_RS04220 (LEO73_04220) | - | 861348..861644 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| LEO73_RS04225 (LEO73_04225) | - | 861669..862232 (-) | 564 | WP_005309592.1 | septation protein A | - |
| LEO73_RS04230 (LEO73_04230) | - | 862337..863842 (-) | 1506 | WP_226009397.1 | pyridoxal-dependent decarboxylase | - |
| LEO73_RS04235 (LEO73_04235) | - | 864061..864696 (+) | 636 | WP_010636289.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=610696 LEO73_RS04210 WP_005309580.1 860012..860332(-) (comEA) [Aeromonas dhakensis strain 71453]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=610696 LEO73_RS04210 WP_005309580.1 860012..860332(-) (comEA) [Aeromonas dhakensis strain 71453]
ATGAACTACAAGACCCTGACCGCCACCTTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCTTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |