Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   KE3_RS02760 Genome accession   NC_021900
Coordinates   507144..507329 (+) Length   61 a.a.
NCBI ID   WP_043894982.1    Uniprot ID   -
Organism   Streptococcus lutetiensis 033     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 502523..507329 507144..507329 within 0


Gene organization within MGE regions


Location: 502523..507329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS10755 (KE3_0556) - 503384..503596 (+) 213 WP_020916369.1 hypothetical protein -
  KE3_RS09950 (KE3_0557) - 503598..504215 (+) 618 WP_020916370.1 hypothetical protein -
  KE3_RS02745 (KE3_0558) - 504508..504711 (+) 204 WP_020916371.1 cold-shock protein -
  KE3_RS02750 (KE3_0559) - 505385..505732 (+) 348 WP_020916372.1 sigma-70 family RNA polymerase sigma factor -
  KE3_RS02755 (KE3_0560) - 505870..506856 (-) 987 WP_020915979.1 IS30 family transposase -
  KE3_RS02760 (KE3_0561) prx 507144..507329 (+) 186 WP_043894982.1 Paratox Regulator

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 7161.24 Da        Isoelectric Point: 4.3466

>NTDB_id=60818 KE3_RS02760 WP_043894982.1 507144..507329(+) (prx) [Streptococcus lutetiensis 033]
MLYYDELKKAIDRGFITGDTIQIVRKNGIVFDYVLPNEPVKPYEVVTTERVADVLEELKEW

Nucleotide


Download         Length: 186 bp        

>NTDB_id=60818 KE3_RS02760 WP_043894982.1 507144..507329(+) (prx) [Streptococcus lutetiensis 033]
ATGTTATATTATGATGAACTAAAAAAGGCAATCGATAGAGGCTTTATAACAGGTGATACTATTCAAATTGTGAGAAAGAA
TGGGATAGTATTTGATTATGTTTTACCTAATGAGCCAGTAAAGCCCTATGAGGTAGTTACTACTGAACGAGTAGCAGACG
TTTTGGAAGAGCTAAAAGAATGGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

66.102

96.721

0.639
  prx Streptococcus pyogenes MGAS315

67.241

95.082

0.639
  prx Streptococcus pyogenes MGAS8232

65.517

95.082

0.623
  prx Streptococcus pyogenes MGAS315

63.793

95.082

0.607
  prx Streptococcus pyogenes MGAS315

69.048

68.852

0.475
  prx Streptococcus pyogenes MGAS315

68.293

67.213

0.459
  prx Streptococcus pyogenes MGAS315

65.854

67.213

0.443

Multiple sequence alignment