Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   KE3_RS00200 Genome accession   NC_021900
Coordinates   35401..35583 (+) Length   60 a.a.
NCBI ID   WP_020915980.1    Uniprot ID   A0AB33AJ17
Organism   Streptococcus lutetiensis 033     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 30401..40583
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS00175 (KE3_0037) - 31389..31610 (+) 222 WP_043894876.1 hypothetical protein -
  KE3_RS00180 (KE3_0038) - 31636..32277 (+) 642 WP_052317403.1 hypothetical protein -
  KE3_RS00185 (KE3_0039) - 32824..33429 (+) 606 Protein_32 IS1595-like element ISSag10 family transposase -
  KE3_RS00190 (KE3_0040) lnu(C) 33453..33947 (+) 495 WP_002837187.1 lincosamide nucleotidyltransferase Lnu(C) -
  KE3_RS00195 (KE3_0041) - 34150..35136 (-) 987 WP_020915979.1 IS30 family transposase -
  KE3_RS00200 (KE3_0042) prx 35401..35583 (+) 183 WP_020915980.1 hypothetical protein Regulator
  KE3_RS00205 (KE3_0043) - 35580..35780 (+) 201 WP_020915981.1 hypothetical protein -
  KE3_RS00210 (KE3_0044) tyrS 35866..37125 (-) 1260 WP_020915982.1 tyrosine--tRNA ligase -
  KE3_RS00215 (KE3_0045) pbp1b 37287..39614 (+) 2328 WP_020915983.1 penicillin-binding protein PBP1B -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 7021.07 Da        Isoelectric Point: 4.2558

>NTDB_id=60795 KE3_RS00200 WP_020915980.1 35401..35583(+) (prx) [Streptococcus lutetiensis 033]
MLYYDELKEAIDRGFIKGDTVQIVRKNGMVFDYVLPNEPVKPYEIVTTERVADVLEELKE

Nucleotide


Download         Length: 183 bp        

>NTDB_id=60795 KE3_RS00200 WP_020915980.1 35401..35583(+) (prx) [Streptococcus lutetiensis 033]
ATGTTATATTATGATGAACTAAAAGAGGCAATCGATAGAGGTTTTATAAAGGGTGATACCGTTCAAATTGTGAGAAAGAA
TGGGATGGTATTTGATTATGTTCTCCCTAACGAACCAGTAAAGCCCTATGAGATAGTTACTACTGAACGAGTAGCAGACG
TTTTGGAAGAGCTAAAAGAATGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

67.797

98.333

0.667

  prx Streptococcus pyogenes MGAS315

65.517

96.667

0.633

  prx Streptococcus pyogenes MGAS8232

65.517

96.667

0.633

  prx Streptococcus pyogenes MGAS315

65.517

96.667

0.633

  prx Streptococcus pyogenes MGAS315

71.429

70

0.5

  prx Streptococcus pyogenes MGAS315

73.171

68.333

0.5

  prx Streptococcus pyogenes MGAS315

68.293

68.333

0.467


Multiple sequence alignment