Detailed information NTG0606223

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABEDC_RS01515
• Genome accession: NZ_CP083571
• Coordinates: 326038..327096 (+)
• Length: 352 a.a.
• NCBI ID: WP_004281140.1
• Uniprot ID: -
• Organism: Acinetobacter lwoffii strain ED9-5a
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 321038..332096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEDC_RS01500 (ABEDC_0309)	-	321093..321896 (+)	804	WP_071852298.1	putative RNA methyltransferase	-
ABEDC_RS01505 (ABEDC_0310)	-	321998..323302 (+)	1305	WP_004282307.1	IS4 family transposase	-
ABEDC_RS01510 (ABEDC_0311)	ponA	323347..325872 (-)	2526	WP_191111810.1	penicillin-binding protein PBP1a	-
ABEDC_RS01515 (ABEDC_0312)	pilM	326038..327096 (+)	1059	WP_004281140.1	pilus assembly protein PilM	Machinery gene
ABEDC_RS01520 (ABEDC_0313)	comN	327096..327734 (+)	639	WP_004281141.1	PilN domain-containing protein	Machinery gene
ABEDC_RS01525 (ABEDC_0314)	comO	327731..328441 (+)	711	WP_191111812.1	type 4a pilus biogenesis protein PilO	Machinery gene
ABEDC_RS01530 (ABEDC_0315)	pilP	328441..328968 (+)	528	WP_005101384.1	pilus assembly protein PilP	Machinery gene
ABEDC_RS01535 (ABEDC_0316)	pilQ	329031..331154 (+)	2124	WP_374952414.1	type IV pilus secretin PilQ	Machinery gene
ABEDC_RS01540 (ABEDC_0317)	aroK	331191..331727 (+)	537	WP_005101380.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39067.62 Da
• Isoelectric Point: 4.5358

>NTDB_id=606223 ABEDC_RS01515 WP_004281140.1 326038..327096(+) (pilM) [Acinetobacter lwoffii strain ED9-5a]
MRRLYRKPNKGLIGVDISSTSVKVLELSVKSGRYWVESYALIPLSENSVVEKNILNPEAVADALGRAINLGNTQSNQAAF
AIPTSMVITKIIEMDADMSDDEREVQIREDAEQYIPFPLDEASLDFEVLPDRLSNPNRVNVLLVATRIENVEARSEVLEI
SSLMPKIADVESFALENAFKVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKIIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKTRALPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=606223 ABEDC_RS01515 WP_004281140.1 326038..327096(+) (pilM) [Acinetobacter lwoffii strain ED9-5a]
GTGCGCAGGTTATATCGTAAACCAAATAAGGGGTTAATAGGAGTCGATATTAGTTCGACTTCTGTTAAGGTTTTAGAACT
TTCTGTAAAAAGTGGCCGTTACTGGGTAGAGAGCTATGCTTTGATCCCATTATCGGAAAACAGTGTTGTTGAAAAAAACA
TCTTAAACCCAGAAGCTGTCGCTGATGCCCTTGGGCGTGCAATTAATTTGGGTAATACCCAGTCGAATCAGGCCGCTTTT
GCGATTCCAACTTCAATGGTCATCACCAAAATCATTGAGATGGATGCAGACATGTCGGATGATGAACGTGAAGTTCAGAT
TCGTGAAGATGCGGAACAATATATTCCTTTTCCACTCGATGAAGCGAGTCTGGACTTTGAAGTTCTGCCAGACCGCCTTT
CCAATCCGAACCGTGTCAATGTGCTGCTGGTCGCGACACGGATCGAAAATGTCGAAGCACGTTCTGAAGTTTTAGAGATT
AGCAGTCTAATGCCTAAGATTGCAGATGTAGAAAGTTTTGCGCTGGAAAATGCCTTTAAGGTATTTTCGGACACTTTGCC
GATGGGGGTCAATACGGTTGGTATTTTAGACATTGGTCATAGTATGACGACCTTGTCGGTGATGCAGAACAACAAGATTA
TTTATACCCGTGAGCAGGTGTTTGGTGGCAAGCAATTGACTCAGGAAATTCAGAATCGTTATGGATTGTCTTTTGAAGAA
GCTGGACGTGCTAAAAAAACCCGTGCCTTGCCGGATGATTATGATATTGAAGTGCTAGAACCATTTCTGGATGCCGTCGT
ACAACAGGCAGCCCGTTCATTGCAGTTCTTCTTTTCATCTTCTCAGTTTAATGAGATTGACCATATTTTACTGGCCGGCG
GGAATGCCAATATTCCAGGTCTGGCAAAATTATTACAACAAAAACTCGGTTACCGTGTCACGATCGCGAATCCATTTTTG
CAAATGGGCTTTTCTCCTCAAATTGATATTAAAAAAATTGAAAATGACGCGTCATCACTCATGGTTGCATGCGGTTTGGC
ATTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	85.227	100	0.852
comM	Acinetobacter nosocomialis M2	85.227	100	0.852
comM	Acinetobacter baylyi ADP1	78.977	100	0.79
pilM	Legionella pneumophila strain ERS1305867	39.266	100	0.395