Detailed information NTG0605084

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: K8Z53_RS08375
• Genome accession: NZ_CP083238
• Coordinates: 1540986..1541558 (-)
• Length: 190 a.a.
• NCBI ID: WP_003185937.1
• Uniprot ID: A0A415J8E4
• Organism: Bacillus licheniformis strain 2709
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1535986..1546558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8Z53_RS08350 (K8Z53_08260)	-	1536311..1536718 (-)	408	WP_003185927.1	CBS domain-containing protein	-
K8Z53_RS08355 (K8Z53_08265)	-	1536781..1537737 (-)	957	WP_003185929.1	magnesium transporter CorA family protein	-
K8Z53_RS08360 (K8Z53_08270)	-	1537898..1539196 (+)	1299	WP_142782340.1	hemolysin family protein	-
K8Z53_RS08365 (K8Z53_08275)	-	1539357..1540568 (+)	1212	WP_142782339.1	ammonium transporter	-
K8Z53_RS08370 (K8Z53_08280)	-	1540587..1540937 (+)	351	WP_142782338.1	P-II family nitrogen regulator	-
K8Z53_RS08375 (K8Z53_08285)	clpP	1540986..1541558 (-)	573	WP_003185937.1	ATP-dependent Clp protease proteolytic subunit	Regulator
K8Z53_RS08380 (K8Z53_08290)	-	1541572..1542177 (-)	606	WP_011198380.1	RNA polymerase sigma factor	-
K8Z53_RS08385 (K8Z53_08295)	-	1542314..1543189 (-)	876	WP_003185941.1	M23 family metallopeptidase	-
K8Z53_RS08390 (K8Z53_08300)	-	1543382..1543879 (+)	498	WP_011198381.1	GNAT family N-acetyltransferase	-
K8Z53_RS08395 (K8Z53_08305)	-	1543927..1544370 (-)	444	WP_009329719.1	YwnF family protein	-
K8Z53_RS08400 (K8Z53_08310)	cls	1544620..1546068 (+)	1449	WP_025806104.1	cardiolipin synthase	-

Sequence

Protein

• Length: 190 a.a.
• Molecular weight: 21049.23 Da
• Isoelectric Point: 5.3785

>NTDB_id=605084 K8Z53_RS08375 WP_003185937.1 1540986..1541558(-) (clpP) [Bacillus licheniformis strain 2709]
MNTIPYVIEKTAAGERSYDIFSRLLKDRIIMIGSEFNDDLANRVTAQLLFLSAEDNEKDISIYINSPGGSTSAGYAILDT
MDYVKPDVRTICVGMAASMGAILLAGGAKGKRYALKNSEIMIHQPLGGVKGQATDMEISAKRIIKLREKIERFFHERTGQ
PIEKLKADMERDYFMDADEAKAYGVIDAVL

Nucleotide

• Length: 573 bp

>NTDB_id=605084 K8Z53_RS08375 WP_003185937.1 1540986..1541558(-) (clpP) [Bacillus licheniformis strain 2709]
ATGAACACCATTCCTTACGTCATTGAGAAAACGGCTGCCGGTGAAAGATCGTACGATATTTTTTCCAGACTTTTAAAAGA
CCGGATCATTATGATCGGTTCTGAATTCAACGATGACCTCGCCAATCGGGTCACCGCCCAATTGCTGTTTTTGTCAGCTG
AAGACAATGAAAAAGACATTTCGATCTATATCAACAGCCCGGGCGGATCAACTTCCGCGGGATATGCAATTTTGGATACG
ATGGATTATGTGAAGCCTGATGTCCGCACGATATGCGTCGGAATGGCCGCTTCCATGGGAGCGATTCTCCTCGCCGGCGG
AGCAAAAGGCAAACGGTATGCACTCAAAAACAGCGAAATCATGATCCATCAGCCGCTCGGCGGCGTCAAAGGACAGGCGA
CAGACATGGAGATTTCAGCGAAGCGGATCATCAAACTGAGGGAAAAAATCGAGCGCTTCTTTCACGAACGAACGGGCCAG
CCCATTGAAAAACTAAAAGCCGACATGGAACGCGATTACTTTATGGATGCGGACGAAGCGAAGGCATACGGTGTTATTGA
TGCTGTTTTGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-190)

3D structure

• AlphaFold DB: A0A415J8E4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	65.263	100	0.653
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.567	98.421	0.616
clpP	Streptococcus thermophilus LMD-9	55.556	99.474	0.553
clpP	Streptococcus pneumoniae Rx1	55.556	99.474	0.553
clpP	Streptococcus pneumoniae D39	55.556	99.474	0.553
clpP	Streptococcus thermophilus LMG 18311	55.556	99.474	0.553
clpP	Streptococcus pneumoniae R6	55.556	99.474	0.553
clpP	Streptococcus pneumoniae TIGR4	55.556	99.474	0.553
clpP	Streptococcus mutans UA159	55.026	99.474	0.547
clpP	Streptococcus pyogenes JRS4	54.497	99.474	0.542
clpP	Streptococcus pyogenes MGAS315	54.497	99.474	0.542
clpP	Lactococcus lactis subsp. cremoris KW2	51.852	99.474	0.516
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	51.323	99.474	0.511