Detailed information NTG0602208

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: K7G42_RS06410
• Genome accession: NZ_CP082783
• Coordinates: 1193200..1194039 (-)
• Length: 279 a.a.
• NCBI ID: WP_003108439.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain KRS02083
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1188200..1199039

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7G42_RS06395 (K7G42_06350)	-	1188789..1189847 (-)	1059	WP_003108442.1	PTS transporter subunit IIC	-
K7G42_RS06400 (K7G42_06355)	-	1190039..1190923 (+)	885	WP_003108441.1	LysR family transcriptional regulator	-
K7G42_RS06405 (K7G42_06360)	topA	1190959..1193094 (-)	2136	WP_003108440.1	type I DNA topoisomerase	-
K7G42_RS06410 (K7G42_06365)	dprA	1193200..1194039 (-)	840	WP_003108439.1	DNA-processing protein DprA	Machinery gene
K7G42_RS06415 (K7G42_06370)	-	1194100..1194645 (-)	546	WP_003108438.1	sugar O-acetyltransferase	-
K7G42_RS06420 (K7G42_06375)	-	1194717..1195490 (-)	774	WP_003108437.1	ribonuclease HII	-
K7G42_RS06425 (K7G42_06380)	ylqF	1195474..1196328 (-)	855	WP_003106918.1	ribosome biogenesis GTPase YlqF	-
K7G42_RS06430 (K7G42_06385)	-	1196502..1196918 (-)	417	WP_003108436.1	MarR family winged helix-turn-helix transcriptional regulator	-
K7G42_RS06435 (K7G42_06390)	-	1196940..1197827 (-)	888	WP_003108434.1	lipoate--protein ligase	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31109.15 Da
• Isoelectric Point: 9.1696

>NTDB_id=602208 K7G42_RS06410 WP_003108439.1 1193200..1194039(-) (dprA) [Streptococcus parauberis strain KRS02083]
MNNFELYKLKKAGLENHHILKIIAYQEKYDKKLSLRNMALISECKQPIIFIENYKSLDIGAIKNEFNLFPSISIFDKNYP
ISLKSIYNPPVLLFYQGDISLLNQPILGVVGSRQATKKGIHAVDKIIEELNSKFVIVSGLARGIDTAAHFAAIKNGGKTI
AVIGSGMTKFYPKENHRLQKYIANNHLLISEYGPAEEPLAYHFPQRNRIIAGLSLGIIVCEARVRSGSLITCKYALDEGR
DIFAIPGTIINNNSEGCHQLIKEGAKCVTNGLDILSEYQ

Nucleotide

• Length: 840 bp

>NTDB_id=602208 K7G42_RS06410 WP_003108439.1 1193200..1194039(-) (dprA) [Streptococcus parauberis strain KRS02083]
ATGAATAATTTCGAACTATACAAATTGAAAAAAGCTGGACTAGAAAATCATCACATTTTAAAAATTATCGCCTATCAGGA
AAAGTATGACAAAAAACTTTCCTTACGTAATATGGCACTCATATCTGAATGCAAGCAACCAATCATTTTTATTGAGAATT
ATAAATCTTTAGACATTGGTGCAATAAAAAATGAATTCAATCTTTTTCCTTCCATTTCAATTTTTGATAAAAACTACCCA
ATTTCTTTAAAATCAATCTATAATCCACCAGTTCTTTTATTTTATCAAGGAGATATTAGCTTATTAAATCAGCCTATTTT
AGGTGTAGTGGGCTCGCGTCAGGCAACAAAAAAAGGTATTCATGCCGTTGATAAAATTATCGAAGAGTTAAATAGTAAGT
TTGTTATTGTAAGTGGATTAGCCAGAGGGATTGATACGGCTGCCCACTTTGCAGCTATCAAAAATGGAGGGAAAACAATT
GCTGTAATTGGTTCAGGGATGACTAAATTTTATCCAAAAGAAAATCATCGACTGCAAAAGTATATTGCAAATAACCATCT
ATTGATTAGTGAATATGGACCAGCAGAAGAACCTTTAGCTTATCATTTTCCTCAACGGAATCGGATAATTGCAGGGCTAT
CATTAGGAATCATAGTCTGTGAAGCCAGAGTCCGTTCTGGAAGTCTAATTACTTGTAAGTATGCACTGGATGAAGGAAGA
GATATTTTTGCAATACCAGGAACGATTATCAATAATAATTCAGAGGGATGTCACCAGCTTATCAAAGAGGGTGCAAAATG
CGTCACAAATGGCTTAGACATCCTTTCAGAATACCAATAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-59)

• DNA recombination-mediator protein A (DNA_processg_A) (72-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	64.029	99.642	0.638
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	57.348	100	0.573
dprA/cilB/dalA	Streptococcus pneumoniae D39	57.348	100	0.573
dprA/cilB/dalA	Streptococcus pneumoniae R6	57.348	100	0.573
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	57.348	100	0.573
dprA/cilB/dalA	Streptococcus mitis SK321	57.348	100	0.573
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	56.631	100	0.566
dprA	Lactococcus lactis subsp. cremoris KW2	54.317	99.642	0.541
dprA	Legionella pneumophila strain ERS1305867	40.345	100	0.419
dprA	Bacillus subtilis subsp. subtilis str. 168	40.927	92.832	0.38
dprA	Glaesserella parasuis strain SC1401	41.6	89.606	0.373