Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   L897_RS01390 Genome accession   NC_021807
Coordinates   265069..265620 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes HSC5     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 260069..270620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L897_RS01390 comX/sigX/comX2/sigX2 265069..265620 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  L897_RS01395 (L897_01460) - 266179..266706 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  L897_RS01400 (L897_01465) yqeH 266706..267824 (+) 1119 WP_020833261.1 ribosome biogenesis GTPase YqeH -
  L897_RS01405 (L897_01470) yhbY 267849..268157 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  L897_RS01410 (L897_01475) - 268226..268858 (+) 633 WP_014407306.1 nicotinate-nucleotide adenylyltransferase -
  L897_RS01415 (L897_01480) yqeK 268855..269448 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  L897_RS01420 (L897_01485) rsfS 269472..269825 (+) 354 WP_042361543.1 ribosome silencing factor -
  L897_RS01425 (L897_01490) - 269873..270616 (+) 744 WP_042361471.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=59917 L897_RS01390 WP_010921894.1 265069..265620(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes HSC5]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=59917 L897_RS01390 WP_010921894.1 265069..265620(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes HSC5]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.