Detailed information NTG0593308

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: K0V03_RS07070
• Genome accession: NZ_CP080508
• Coordinates: 1294562..1295155 (+)
• Length: 197 a.a.
• NCBI ID: WP_003228214.1
• Uniprot ID: A0A199WEF2
• Organism: Bacillus subtilis strain HD15
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1289562..1300155

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K0V03_RS07035 (K0V03_07035)	-	1289587..1289898 (+)	312	WP_085185675.1	hypothetical protein	-
K0V03_RS07040 (K0V03_07040)	-	1289967..1290191 (+)	225	WP_085185673.1	helix-turn-helix transcriptional regulator	-
K0V03_RS07045 (K0V03_07045)	-	1290715..1290936 (+)	222	WP_085185671.1	helix-turn-helix domain-containing protein	-
K0V03_RS07050 (K0V03_07050)	-	1290949..1291929 (-)	981	WP_085185669.1	tyrosine-type recombinase/integrase	-
K0V03_RS07055 (K0V03_07055)	-	1292132..1292866 (-)	735	WP_085185667.1	helix-turn-helix domain-containing protein	-
K0V03_RS07060 (K0V03_07060)	-	1293027..1294016 (-)	990	WP_085185665.1	tyrosine-type recombinase/integrase	-
K0V03_RS07070 (K0V03_07070)	clpP	1294562..1295155 (+)	594	WP_003228214.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
K0V03_RS07075 (K0V03_07075)	pgmB	1295199..1295873 (-)	675	WP_108029105.1	beta-phosphoglucomutase	-
K0V03_RS07080 (K0V03_07080)	malL	1295870..1297555 (-)	1686	WP_032726910.1	oligo-1,6-glucosidase	-
K0V03_RS07085 (K0V03_07085)	mdxK	1297548..1299821 (-)	2274	WP_085185662.1	maltose phosphorylase	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21682.00 Da
• Isoelectric Point: 4.9416

>NTDB_id=593308 K0V03_RS07070 WP_003228214.1 1294562..1295155(+) (clpP) [Bacillus subtilis strain HD15]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=593308 K0V03_RS07070 WP_003228214.1 1294562..1295155(+) (clpP) [Bacillus subtilis strain HD15]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTGTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
GGAAAAAGGCAAACGCTATGCACTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAAGCGA
CAGAAATTGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTAGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGTGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A199WEF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	100	100	1
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.617	95.431	0.655
clpP	Streptococcus thermophilus LMG 18311	58.163	99.492	0.579
clpP	Streptococcus thermophilus LMD-9	58.163	99.492	0.579
clpP	Streptococcus pneumoniae D39	57.812	97.462	0.563
clpP	Streptococcus pneumoniae Rx1	57.812	97.462	0.563
clpP	Streptococcus pneumoniae R6	57.812	97.462	0.563
clpP	Streptococcus pneumoniae TIGR4	57.812	97.462	0.563
clpP	Lactococcus lactis subsp. cremoris KW2	57.895	96.447	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	96.447	0.538