Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   MZN68_RS10110 Genome accession   NZ_CP096117
Coordinates   2007225..2008412 (+) Length   395 a.a.
NCBI ID   WP_015815969.1    Uniprot ID   -
Organism   Neisseria meningitidis strain DFS-1910310016     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2002225..2013412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN68_RS10095 (MZN68_09925) - 2003145..2003744 (+) 600 WP_003690128.1 DUF4390 domain-containing protein -
  MZN68_RS10100 (MZN68_09930) - 2003744..2005864 (+) 2121 WP_237986286.1 PAS domain-containing sensor histidine kinase -
  MZN68_RS10105 (MZN68_09935) - 2005857..2007134 (+) 1278 WP_076612526.1 sigma-54 dependent transcriptional regulator -
  MZN68_RS10110 (MZN68_09940) dprA 2007225..2008412 (+) 1188 WP_015815969.1 DNA-processing protein DprA Machinery gene
  MZN68_RS10115 (MZN68_09945) - 2008438..2008899 (+) 462 WP_002215351.1 DUF494 domain-containing protein -
  MZN68_RS10120 (MZN68_09950) topA 2008971..2011277 (+) 2307 WP_002234458.1 type I DNA topoisomerase -
  MZN68_RS10125 (MZN68_09955) - 2011350..2012045 (-) 696 WP_002233407.1 hypothetical protein -
  MZN68_RS10130 (MZN68_09960) - 2012736..2013113 (+) 378 WP_002233408.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 395 a.a.        Molecular weight: 41815.84 Da        Isoelectric Point: 6.1732

>NTDB_id=586087 MZN68_RS10110 WP_015815969.1 2007225..2008412(+) (dprA) [Neisseria meningitidis strain DFS-1910310016]
MTEDERFAWLQLAFTPYIGAESFLLLLRRFGSASNALSAPAEQVAPAVRHKQAAEAWRNAEKRALARQAAEAALEWEMRD
GCRLMLLQDEDFPEMLTQGLTAPPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGRALGEKGIPVVSGMASGIDT
AAHQGALQAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFPRRNRLIAALSQVTLVVEAALES
GSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLTECLDDILNECPGLLQNTGASSYSINKDTSDTGSRAVQA
AYAPPPAAKMPSEGAAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQRIRT

Nucleotide


Download         Length: 1188 bp        

>NTDB_id=586087 MZN68_RS10110 WP_015815969.1 2007225..2008412(+) (dprA) [Neisseria meningitidis strain DFS-1910310016]
ATGACAGAGGACGAACGTTTCGCGTGGCTGCAATTGGCGTTTACGCCCTATATCGGCGCGGAAAGCTTCCTGCTGCTGCT
GCGCCGTTTCGGCAGCGCGTCAAACGCCCTGTCCGCACCGGCGGAACAGGTCGCCCCGGCGGTGCGGCACAAGCAGGCGG
CCGAGGCTTGGCGCAATGCGGAAAAACGCGCTTTGGCGCGGCAGGCGGCAGAAGCGGCGTTGGAATGGGAAATGCGGGAC
GGATGCCGCCTGATGCTGCTTCAGGATGAAGATTTCCCCGAAATGCTGACGCAGGGGCTGACCGCGCCGCCGGTTTTGTT
TTTGCGCGGCAACGTGCGGCTGCTGCACAAGCCTTCCGCCGCCATCGTCGGCAGCCGCCATGCCACGCCGCAGGCGATGC
GGATTGCCAAAGATTTCGGCAGGGCGTTGGGAGAGAAAGGCATTCCCGTTGTGTCGGGTATGGCTTCGGGCATCGATACC
GCCGCCCATCAGGGTGCGTTGCAGGCGGAAGGCGGCACCATCGCCGTGTGGGGGACGGGCATAGACCGCATTTATCCGCC
GTCCAATAAAAACCTTGCCTATGAAATCGCCGAAAAAGGACTGATTGTCAGCGAGTTCCCCATCGGCACGCGCCCGTATG
CCGGCAATTTTCCGCGCCGCAACCGCCTGATTGCCGCGCTGTCGCAGGTTACGCTGGTGGTTGAAGCCGCGTTGGAATCC
GGTTCGCTGATTACCGCCGGCCTGGCGGCAGAAATGGGGCGCGAAGTGATGGCGGTACCCGGTTCGATAGACAATCCACA
CAGCAAAGGCTGCCACAAACTGATTAAAGACGGCGCGAAACTGACGGAATGTTTGGACGACATCCTGAACGAATGCCCGG
GTCTATTGCAAAATACGGGTGCTTCGTCATATTCTATAAATAAGGATACGTCCGACACGGGCAGCCGCGCCGTTCAGGCG
GCATACGCCCCGCCGCCTGCCGCAAAAATGCCGTCTGAAGGGGCGGCAGGCGGCACAGCCGTCGGCGGCATACTGGATAA
AATGGGTTTCGACCCCATCCATCCCGACGTGCTTGCCGGACAGTTGGCTATGCCTGCCGCAGATTTGTATGCCGCACTGT
TGGAATTGGAATTGGACGGCAGCGTTGCCGCAATGCCCGGCGGCAGATACCAGCGTATCCGAACTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Neisseria gonorrhoeae MS11

96.709

100

0.967

  dprA Neisseria gonorrhoeae strain FA1090

96.456

100

0.965

  dprA Neisseria meningitidis MC58

89.673

100

0.901

  dprA Neisseria meningitidis strain C311

89.673

100

0.901

  dprA Glaesserella parasuis strain SC1401

40.576

96.709

0.392

  dprA Vibrio cholerae O1 biovar El Tor strain E7946

37.975

100

0.38

  dprA Vibrio cholerae strain A1552

37.975

100

0.38