Detailed information NTG0058413

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: B1NLA3E_RS20055
• Genome accession: NC_021171
• Coordinates: 4163194..4163847 (+)
• Length: 217 a.a.
• NCBI ID: WP_268870642.1
• Uniprot ID: -
• Organism: Bacillus sp. 1NLA3E
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4158194..4168847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B1NLA3E_RS20035 (B1NLA3E_19280)	-	4158822..4159844 (-)	1023	WP_015595641.1	sugar-binding transcriptional regulator	-
B1NLA3E_RS20040 (B1NLA3E_19285)	-	4159968..4160216 (-)	249	WP_015595642.1	glutaredoxin family protein	-
B1NLA3E_RS20045 (B1NLA3E_19290)	rpoN	4160234..4161550 (-)	1317	WP_015595643.1	RNA polymerase factor sigma-54	-
B1NLA3E_RS25750	-	4161895..4162026 (+)	132	Protein_3970	transposase	-
B1NLA3E_RS20055 (B1NLA3E_19295)	clpP	4163194..4163847 (+)	654	WP_268870642.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
B1NLA3E_RS20060 (B1NLA3E_19300)	-	4164076..4164333 (-)	258	WP_015595645.1	HPr family phosphocarrier protein	-
B1NLA3E_RS20065 (B1NLA3E_19305)	whiA	4164359..4165306 (-)	948	WP_015595646.1	DNA-binding protein WhiA	-
B1NLA3E_RS20070 (B1NLA3E_19310)	-	4165359..4166327 (-)	969	WP_015595647.1	YvcK family protein	-
B1NLA3E_RS20075 (B1NLA3E_19315)	rapZ	4166324..4167217 (-)	894	WP_015595648.1	RNase adapter RapZ	-
B1NLA3E_RS20080 (B1NLA3E_19320)	-	4167308..4167775 (-)	468	WP_015595649.1	8-oxo-dGTP diphosphatase	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 24198.03 Da
• Isoelectric Point: 5.8749

>NTDB_id=58413 B1NLA3E_RS20055 WP_268870642.1 4163194..4163847(+) (clpP) [Bacillus sp. 1NLA3E]
MKEVYLVIFRLKEEQKMNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVSNSIVAQLLFLEAENPEKDISIYI
NSPGGSITAGMAIYDTMQFIKPDVQTICIGMAASMGAFLLAAGTIGKRYCLPNSEVMIHQPLGGAQGQATEIEIAAKRIL
FLRDKLNGILAERTGQPLEVIGRDTERDNFMTAERAKEYGLVDHIISRSKISEKKDK

Nucleotide

• Length: 654 bp

>NTDB_id=58413 B1NLA3E_RS20055 WP_268870642.1 4163194..4163847(+) (clpP) [Bacillus sp. 1NLA3E]
ATGAAAGAGGTCTACCTAGTAATTTTCAGATTAAAGGAGGAACAGAAAATGAATTTGATTCCTACAGTAATTGAACAGAC
TAACCGTGGCGAGCGGGCATATGATATTTACTCTCGTCTATTAAAAGATCGCATTATCATGCTTGGAAGCGCAATTGATG
ACAATGTTTCCAACTCGATTGTTGCGCAATTGTTGTTTTTAGAAGCAGAAAATCCTGAAAAAGATATATCCATTTACATC
AATAGTCCTGGTGGAAGCATTACAGCTGGAATGGCTATTTACGACACAATGCAATTCATCAAACCTGATGTACAAACAAT
TTGTATCGGTATGGCAGCTTCAATGGGAGCATTCCTACTTGCAGCTGGTACTATTGGAAAGCGTTACTGCTTACCAAACA
GTGAAGTCATGATTCACCAACCACTTGGCGGAGCACAAGGGCAAGCAACGGAAATTGAAATCGCTGCAAAGCGCATTCTA
TTCCTTCGTGATAAACTAAATGGTATCTTAGCAGAGCGTACTGGTCAACCACTTGAAGTGATTGGACGAGATACTGAGCG
TGATAACTTTATGACTGCTGAAAGAGCAAAAGAGTACGGTCTTGTCGACCACATCATTTCTCGCAGCAAAATTAGCGAAA
AAAAGGATAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (29-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	86.082	89.401	0.77
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	88.018	0.594
clpP	Streptococcus thermophilus LMG 18311	57.436	89.862	0.516
clpP	Streptococcus thermophilus LMD-9	57.436	89.862	0.516
clpP	Lactococcus lactis subsp. cremoris KW2	56.923	89.862	0.512
clpP	Streptococcus pneumoniae D39	55.612	90.323	0.502
clpP	Streptococcus pneumoniae Rx1	55.612	90.323	0.502
clpP	Streptococcus pneumoniae R6	55.612	90.323	0.502
clpP	Streptococcus pneumoniae TIGR4	55.612	90.323	0.502
clpP	Streptococcus pyogenes JRS4	54.872	89.862	0.493
clpP	Streptococcus pyogenes MGAS315	54.872	89.862	0.493
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.872	89.862	0.493
clpP	Streptococcus mutans UA159	53	92.166	0.488