Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | B1NLA3E_RS16290 | Genome accession | NC_021171 |
| Coordinates | 3402242..3402556 (-) | Length | 104 a.a. |
| NCBI ID | WP_015594935.1 | Uniprot ID | N0AW43 |
| Organism | Bacillus sp. 1NLA3E | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3397242..3407556
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1NLA3E_RS16255 (B1NLA3E_15650) | - | 3397882..3399570 (+) | 1689 | WP_015594928.1 | SNF2-related protein | - |
| B1NLA3E_RS16260 (B1NLA3E_15655) | - | 3399548..3400339 (+) | 792 | WP_015594929.1 | YqhG family protein | - |
| B1NLA3E_RS16265 (B1NLA3E_15660) | - | 3400414..3400593 (-) | 180 | WP_015594930.1 | YqzE family protein | - |
| B1NLA3E_RS16270 (B1NLA3E_15665) | comGG | 3400687..3401067 (-) | 381 | WP_015594931.1 | competence type IV pilus minor pilin ComGG | - |
| B1NLA3E_RS25850 (B1NLA3E_15670) | comGF | 3401068..3401571 (-) | 504 | WP_328285110.1 | competence type IV pilus minor pilin ComGF | - |
| B1NLA3E_RS16280 (B1NLA3E_15675) | - | 3401489..3401818 (-) | 330 | WP_015594933.1 | hypothetical protein | - |
| B1NLA3E_RS16285 (B1NLA3E_15680) | comGD | 3401802..3402242 (-) | 441 | WP_015594934.1 | competence type IV pilus minor pilin ComGD | - |
| B1NLA3E_RS16290 (B1NLA3E_15685) | comGC | 3402242..3402556 (-) | 315 | WP_015594935.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| B1NLA3E_RS16295 (B1NLA3E_15690) | comGB | 3402572..3403600 (-) | 1029 | WP_015594936.1 | competence type IV pilus assembly protein ComGB | - |
| B1NLA3E_RS16300 (B1NLA3E_15695) | - | 3403593..3404228 (-) | 636 | Protein_3243 | ATPase, T2SS/T4P/T4SS family | - |
| B1NLA3E_RS16305 (B1NLA3E_15700) | - | 3404281..3405717 (+) | 1437 | WP_015594938.1 | recombinase family protein | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 11259.00 Da Isoelectric Point: 4.6982
>NTDB_id=58400 B1NLA3E_RS16290 WP_015594935.1 3402242..3402556(-) (comGC) [Bacillus sp. 1NLA3E]
MKNEKGFTLIEMMIVLLIISVLLIITIPNVAKHNANINTKGCQAYVKMVEAQVQAYHLDLQKYPASTQELIDEGYLKSGE
TACPDSTNIVIGADGEVTTTTSGS
MKNEKGFTLIEMMIVLLIISVLLIITIPNVAKHNANINTKGCQAYVKMVEAQVQAYHLDLQKYPASTQELIDEGYLKSGE
TACPDSTNIVIGADGEVTTTTSGS
Nucleotide
Download Length: 315 bp
>NTDB_id=58400 B1NLA3E_RS16290 WP_015594935.1 3402242..3402556(-) (comGC) [Bacillus sp. 1NLA3E]
ATGAAAAATGAAAAAGGATTTACTCTAATAGAAATGATGATTGTCTTATTAATTATTTCAGTGTTACTAATTATTACGAT
TCCTAATGTTGCAAAGCATAATGCAAATATCAATACAAAAGGCTGTCAAGCTTATGTGAAAATGGTTGAAGCACAGGTCC
AAGCGTACCATCTTGATCTTCAAAAATACCCAGCAAGTACCCAAGAGTTAATTGATGAGGGTTATTTAAAGAGTGGTGAA
ACAGCTTGTCCCGATAGTACCAATATTGTGATTGGGGCAGATGGGGAGGTAACCACGACTACAAGTGGTTCCTAA
ATGAAAAATGAAAAAGGATTTACTCTAATAGAAATGATGATTGTCTTATTAATTATTTCAGTGTTACTAATTATTACGAT
TCCTAATGTTGCAAAGCATAATGCAAATATCAATACAAAAGGCTGTCAAGCTTATGTGAAAATGGTTGAAGCACAGGTCC
AAGCGTACCATCTTGATCTTCAAAAATACCCAGCAAGTACCCAAGAGTTAATTGATGAGGGTTATTTAAAGAGTGGTGAA
ACAGCTTGTCCCGATAGTACCAATATTGTGATTGGGGCAGATGGGGAGGTAACCACGACTACAAGTGGTTCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
52.632 |
91.346 |
0.481 |
| comGC | Staphylococcus aureus MW2 |
46.392 |
93.269 |
0.433 |
| comGC | Staphylococcus aureus N315 |
46.392 |
93.269 |
0.433 |