Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   MUY23_RS03180 Genome accession   NZ_CP095162
Coordinates   631082..631297 (+) Length   71 a.a.
NCBI ID   WP_024395066.1    Uniprot ID   -
Organism   Streptococcus suis strain TJS75     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 626082..636297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUY23_RS03150 - 626333..626767 (+) 435 WP_002937915.1 DUF1492 domain-containing protein -
  MUY23_RS03155 - 626864..627211 (+) 348 WP_002937914.1 HNH endonuclease signature motif containing protein -
  MUY23_RS03160 - 627290..627652 (+) 363 WP_002937910.1 hypothetical protein -
  MUY23_RS03165 - 627649..628914 (+) 1266 WP_002937907.1 phage portal protein -
  MUY23_RS03170 - 628907..629308 (+) 402 Protein_609 hypothetical protein -
  MUY23_RS03175 - 629493..630695 (-) 1203 WP_002935596.1 IS110 family transposase -
  MUY23_RS03180 prx 631082..631297 (+) 216 WP_024395066.1 hypothetical protein Regulator
  MUY23_RS03185 - 631416..632630 (-) 1215 WP_024390438.1 chloride channel protein -
  MUY23_RS03190 - 632620..632898 (-) 279 WP_013730456.1 chorismate mutase -
  MUY23_RS03195 rpsN 632980..633249 (-) 270 WP_002940393.1 30S ribosomal protein S14 -
  MUY23_RS03200 - 633389..633850 (-) 462 WP_012775265.1 flavodoxin -
  MUY23_RS03205 - 633945..634889 (+) 945 WP_013730455.1 bifunctional oligoribonuclease/PAP phosphatase NrnA -
  MUY23_RS03210 - 634876..635904 (+) 1029 WP_013730454.1 FAD:protein FMN transferase -
  MUY23_RS03215 - 636023..636265 (+) 243 WP_012027466.1 type B 50S ribosomal protein L31 -

Sequence

Protein


Download         Length: 71 a.a.        Molecular weight: 8355.57 Da        Isoelectric Point: 4.8537

>NTDB_id=582733 MUY23_RS03180 WP_024395066.1 631082..631297(+) (prx) [Streptococcus suis strain TJS75]
MLEYEELKQAVDDGYITGDTVNIVRRDGKIFDYVLPGEEVRPWEVVREEKVVDVMRELKSSPQIRPKSFKK

Nucleotide


Download         Length: 216 bp        

>NTDB_id=582733 MUY23_RS03180 WP_024395066.1 631082..631297(+) (prx) [Streptococcus suis strain TJS75]
ATGTTAGAATACGAAGAATTAAAACAAGCAGTAGATGACGGATATATTACAGGCGATACAGTAAATATCGTACGTCGTGA
CGGCAAGATATTTGATTATGTTTTGCCAGGCGAAGAGGTCAGACCATGGGAAGTAGTGAGAGAAGAGAAAGTAGTGGATG
TGATGAGGGAATTGAAGTCGTCGCCCCAAATCCGCCCCAAAAGTTTTAAAAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

68.966

81.69

0.563
  prx Streptococcus pyogenes MGAS315

65.517

81.69

0.535
  prx Streptococcus pyogenes MGAS8232

65.517

81.69

0.535
  prx Streptococcus pyogenes MGAS315

60.345

81.69

0.493
  prx Streptococcus pyogenes MGAS315

73.81

59.155

0.437
  prx Streptococcus pyogenes MGAS315

73.171

57.746

0.423
  prx Streptococcus pyogenes MGAS315

68.293

57.746

0.394