Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   VB13_RS01450 Genome accession   NZ_CP077685
Coordinates   272559..273110 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M49 591     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 267559..278110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VB13_RS01450 (VB13_01500) comX/sigX/comX2/sigX2 272559..273110 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  VB13_RS01455 (VB13_01505) - 273669..274196 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  VB13_RS01460 (VB13_01510) yqeH 274196..275314 (+) 1119 WP_219050311.1 ribosome biogenesis GTPase YqeH -
  VB13_RS01465 (VB13_01515) yhbY 275339..275647 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  VB13_RS01470 (VB13_01520) - 275716..276348 (+) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -
  VB13_RS01475 (VB13_01525) yqeK 276345..276938 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  VB13_RS01480 (VB13_01530) rsfS 276962..277315 (+) 354 WP_015055915.1 ribosome silencing factor -
  VB13_RS01485 (VB13_01535) - 277363..278106 (+) 744 WP_043885008.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=582227 VB13_RS01450 WP_010921894.1 272559..273110(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain M49 591]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=582227 VB13_RS01450 WP_010921894.1 272559..273110(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain M49 591]
ATGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATTTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.