Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   MP619_RS05050 Genome accession   NZ_CP095081
Coordinates   965440..965622 (+) Length   60 a.a.
NCBI ID   WP_136059052.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain WJ001     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 960440..970622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP619_RS05015 (MP619_04995) - 961374..961808 (+) 435 WP_268227878.1 DUF1617 family protein -
  MP619_RS05020 (MP619_05000) - 961906..962310 (+) 405 WP_129555899.1 DUF1366 domain-containing protein -
  MP619_RS05025 (MP619_05005) - 962373..962531 (+) 159 WP_172595988.1 hypothetical protein -
  MP619_RS05030 (MP619_05010) - 962540..962914 (+) 375 WP_129555898.1 phage holin family protein -
  MP619_RS05035 (MP619_05015) - 963037..964233 (+) 1197 WP_268227879.1 glucosaminidase domain-containing protein -
  MP619_RS05040 (MP619_05020) - 964438..964608 (+) 171 WP_155782710.1 hypothetical protein -
  MP619_RS05045 (MP619_05025) - 964605..965186 (+) 582 WP_143935253.1 hypothetical protein -
  MP619_RS05050 (MP619_05030) prx 965440..965622 (+) 183 WP_136059052.1 Paratox Regulator
  MP619_RS05055 (MP619_05035) ndk 966048..966506 (+) 459 WP_003060137.1 nucleoside-diphosphate kinase -
  MP619_RS05060 (MP619_05040) lepA 966576..968408 (+) 1833 WP_129555607.1 translation elongation factor 4 -
  MP619_RS05065 (MP619_05045) msrB 968584..969021 (+) 438 WP_129555608.1 peptide-methionine (R)-S-oxide reductase MsrB -
  MP619_RS05070 (MP619_05050) - 969034..969684 (+) 651 WP_129555609.1 HD domain-containing protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 7022.03 Da        Isoelectric Point: 3.9286

>NTDB_id=581835 MP619_RS05050 WP_136059052.1 965440..965622(+) (prx) [Streptococcus dysgalactiae strain WJ001]
MLTYDEFKQAIDDGYITTDAVMIVRKNGQIFDYVLPGEEVRPWEIVIEERVAEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=581835 MP619_RS05050 WP_136059052.1 965440..965622(+) (prx) [Streptococcus dysgalactiae strain WJ001]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGATGACGGCTATATCACAACAGACGCAGTAATGATCGTGCGCAAGAA
CGGACAAATTTTTGATTATGTCTTGCCAGGAGAGGAAGTCAGGCCATGGGAGATTGTGATCGAGGAGAGGGTGGCGGAGG
TGATGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85

100

0.85

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

76.667

100

0.767

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS8232

68.333

100

0.683

  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6

  prx Streptococcus pyogenes MGAS315

73.171

68.333

0.5