Detailed information NTG0581518

Bioinformatically predicted

Overview

• Name: vicR
• Type: Regulator
• Locus tag: JGX27_RS08155
• Genome accession: NZ_CP077423
• Coordinates: 1620928..1621638 (-)
• Length: 236 a.a.
• NCBI ID: WP_009854646.1
• Uniprot ID: -
• Organism: Streptococcus gallolyticus subsp. gallolyticus TX20005
• Function: repress comCDE expression; repress comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 1615928..1626638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JGX27_RS08140 (JGX27_08140)	rnc	1617568..1618254 (-)	687	WP_009854642.1	ribonuclease III	-
JGX27_RS11410	-	1618540..1618665 (-)	126	WP_009854643.1	hypothetical protein	-
JGX27_RS08145 (JGX27_08145)	vicX	1618773..1619582 (-)	810	WP_009854644.1	MBL fold metallo-hydrolase	Regulator
JGX27_RS08150 (JGX27_08150)	vicK	1619583..1620935 (-)	1353	WP_009854645.1	cell wall metabolism sensor histidine kinase VicK	Regulator
JGX27_RS08155 (JGX27_08155)	vicR	1620928..1621638 (-)	711	WP_009854646.1	response regulator YycF	Regulator
JGX27_RS08160 (JGX27_08160)	-	1621943..1622707 (+)	765	WP_009854647.1	amino acid ABC transporter ATP-binding protein	-
JGX27_RS08165 (JGX27_08165)	-	1622718..1623530 (+)	813	WP_014620198.1	transporter substrate-binding domain-containing protein	-
JGX27_RS08170 (JGX27_08170)	-	1623547..1624251 (+)	705	WP_009854649.1	amino acid ABC transporter permease	-
JGX27_RS08175 (JGX27_08175)	-	1624263..1624910 (+)	648	WP_009854650.1	amino acid ABC transporter permease	-
JGX27_RS08180 (JGX27_08180)	-	1625002..1625610 (-)	609	WP_009854651.1	VTT domain-containing protein	-
JGX27_RS08185 (JGX27_08185)	-	1625858..1626160 (-)	303	WP_009854652.1	PepSY domain-containing protein	-

Sequence

Protein

• Length: 236 a.a.
• Molecular weight: 27150.94 Da
• Isoelectric Point: 4.6512

>NTDB_id=581518 JGX27_RS08155 WP_009854646.1 1620928..1621638(-) (vicR) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
MKKILIVDDEKPISDIIKFNLTKEGYETVTAFDGREAITKFEEEDPDLIILDLMLPELDGLEVAKEVRKTSHIPIIMLSA
KDSEFDKVIGLEIGADDYVTKPFSNRELLARVKAHLRRTENIETAVAEENASASNSEITIGDLKILPDAFVAQKRGEDIE
LTHREFELLHHLATHMGQVMTREYLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPEYILTRRGVGYYMKSYE

Nucleotide

• Length: 711 bp

>NTDB_id=581518 JGX27_RS08155 WP_009854646.1 1620928..1621638(-) (vicR) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
ATGAAAAAAATTCTTATCGTTGATGATGAAAAACCAATTTCGGATATTATTAAATTTAATTTAACTAAAGAAGGTTATGA
AACCGTAACGGCTTTTGATGGTCGTGAAGCTATTACAAAGTTTGAGGAAGAAGATCCAGATTTGATTATCTTGGATTTGA
TGTTGCCAGAATTGGACGGACTTGAAGTGGCTAAAGAAGTTCGCAAGACAAGTCATATTCCAATCATTATGTTGTCTGCT
AAGGATAGCGAGTTTGATAAAGTTATCGGACTTGAAATCGGTGCAGATGACTATGTAACCAAACCATTTTCAAATCGTGA
ATTGTTGGCGCGTGTTAAAGCGCACCTTCGTCGTACAGAAAATATTGAAACAGCAGTTGCTGAAGAAAATGCTTCTGCTT
CAAATTCAGAAATCACAATTGGCGACTTGAAAATCTTACCAGACGCCTTTGTGGCACAAAAACGTGGTGAAGATATCGAA
TTAACACACCGTGAGTTTGAATTGCTTCATCATTTGGCAACACATATGGGACAAGTCATGACCCGTGAATATCTTTTGGA
AACCGTTTGGGGCTATGATTATTTTGGTGATGTGCGTACGGTTGACGTAACCATTCGTCGTTTACGTGAAAAAATCGAAG
ACACACCAAGCCGTCCAGAATATATTTTGACACGTCGTGGTGTTGGGTACTACATGAAGTCATATGAATGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (4-113)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (156-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
vicR	Streptococcus mutans UA159	89.831	100	0.898
micA	Streptococcus pneumoniae Cp1015	77.778	99.153	0.771
covR	Streptococcus salivarius strain HSISS4	47.845	98.305	0.47
covR	Lactococcus lactis subsp. lactis strain DGCC12653	46.121	98.305	0.453
scnR	Streptococcus mutans UA159	37.288	100	0.373