Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   JGX27_RS08145 Genome accession   NZ_CP077423
Coordinates   1618773..1619582 (-) Length   269 a.a.
NCBI ID   WP_009854644.1    Uniprot ID   A0A1H7V9H2
Organism   Streptococcus gallolyticus subsp. gallolyticus TX20005     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1613773..1624582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JGX27_RS08135 (JGX27_08135) smc 1613898..1617437 (-) 3540 WP_009854641.1 chromosome segregation protein SMC -
  JGX27_RS08140 (JGX27_08140) rnc 1617568..1618254 (-) 687 WP_009854642.1 ribonuclease III -
  JGX27_RS11410 - 1618540..1618665 (-) 126 WP_009854643.1 hypothetical protein -
  JGX27_RS08145 (JGX27_08145) vicX 1618773..1619582 (-) 810 WP_009854644.1 MBL fold metallo-hydrolase Regulator
  JGX27_RS08150 (JGX27_08150) vicK 1619583..1620935 (-) 1353 WP_009854645.1 cell wall metabolism sensor histidine kinase VicK Regulator
  JGX27_RS08155 (JGX27_08155) vicR 1620928..1621638 (-) 711 WP_009854646.1 response regulator YycF Regulator
  JGX27_RS08160 (JGX27_08160) - 1621943..1622707 (+) 765 WP_009854647.1 amino acid ABC transporter ATP-binding protein -
  JGX27_RS08165 (JGX27_08165) - 1622718..1623530 (+) 813 WP_014620198.1 transporter substrate-binding domain-containing protein -
  JGX27_RS08170 (JGX27_08170) - 1623547..1624251 (+) 705 WP_009854649.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30298.24 Da        Isoelectric Point: 5.3852

>NTDB_id=581516 JGX27_RS08145 WP_009854644.1 1618773..1619582(-) (vicX) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
MSENAFKYSILASGSTGNSFYVETPQKRFLIDAGLTGKKITSLLAEIDRKPEDLDAIFITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKLDLAQKHIFERGKTLTLGDIDIESFGVSHDAVEPQFYRLMKDNKSFVVLTDTGYVSDRMAG
IIENADGYLIESNHDVEILRSGSYPWSLKQRILSDKGHLSNEDGAGTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLIQADFGVGYDMKVFDTSPDEATPLTEL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=581516 JGX27_RS08145 WP_009854644.1 1618773..1619582(-) (vicX) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
ATGTCTGAAAATGCTTTTAAATATAGTATTTTAGCCTCCGGTTCAACTGGAAATTCTTTTTATGTGGAAACACCACAAAA
ACGTTTTTTGATTGATGCGGGTTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCAGAAGACT
TAGATGCTATTTTTATCACACACGAACATTCTGATCATATCAAAGGGGTTGGGGTGTTAGCACGTCGTTATAATCTTGAT
GTTTATGCGAATGAAAAAACGTGGCAAATGATTGATGAGCGAAATATGATCGGAAAGCTTGATTTAGCTCAAAAACATAT
TTTTGAACGTGGGAAAACATTGACACTTGGTGACATTGATATTGAAAGTTTTGGTGTTAGCCACGATGCCGTTGAGCCAC
AATTTTATCGTTTGATGAAAGATAATAAATCATTTGTTGTCTTAACAGATACAGGTTATGTTAGTGACCGCATGGCAGGA
ATTATTGAAAATGCTGACGGTTATTTGATTGAATCGAATCATGACGTTGAGATTTTACGTTCAGGCTCTTATCCGTGGAG
TTTGAAACAACGTATCCTATCTGATAAAGGACACTTGTCAAACGAAGATGGTGCTGGAACAATGATTCGAACCATTGGAA
ATCGCACGAAGAAAATTTACCTTGGACATTTGAGTAAAGAAAACAATATCAAAGAATTGGCTCACATGACCATGGAAAAT
AATCTTATTCAAGCTGACTTTGGGGTTGGTTATGACATGAAAGTCTTTGATACCTCACCAGACGAAGCAACACCATTAAC
AGAGTTATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1H7V9H2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766