Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | I6L38_RS01050 | Genome accession | NZ_CP077394 |
| Coordinates | 196424..196744 (-) | Length | 106 a.a. |
| NCBI ID | WP_005309580.1 | Uniprot ID | K1K148 |
| Organism | Aeromonas sp. FDAARGOS 1408 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 191424..201744
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L38_RS01030 (I6L38_01030) | - | 191729..192406 (-) | 678 | WP_043171750.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| I6L38_RS01035 (I6L38_01035) | - | 192762..193733 (+) | 972 | WP_005309570.1 | response regulator | - |
| I6L38_RS01040 (I6L38_01040) | - | 193806..195203 (-) | 1398 | WP_026459194.1 | peptide MFS transporter | - |
| I6L38_RS01045 (I6L38_01045) | galU | 195417..196328 (-) | 912 | WP_043171881.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| I6L38_RS01050 (I6L38_01050) | comEA | 196424..196744 (-) | 321 | WP_005309580.1 | ComEA family DNA-binding protein | Machinery gene |
| I6L38_RS01055 (I6L38_01055) | cysQ | 196911..197681 (+) | 771 | WP_043171882.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| I6L38_RS01060 (I6L38_01060) | - | 197760..198056 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| I6L38_RS01065 (I6L38_01065) | - | 198081..198644 (-) | 564 | WP_005309592.1 | septation protein A | - |
| I6L38_RS01070 (I6L38_01070) | - | 198749..200254 (-) | 1506 | WP_043171883.1 | pyridoxal-dependent decarboxylase | - |
| I6L38_RS01075 (I6L38_01075) | - | 200473..201108 (+) | 636 | WP_010636289.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=581107 I6L38_RS01050 WP_005309580.1 196424..196744(-) (comEA) [Aeromonas sp. FDAARGOS 1408]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=581107 I6L38_RS01050 WP_005309580.1 196424..196744(-) (comEA) [Aeromonas sp. FDAARGOS 1408]
ATGAACTACAAGACCCTGACCGCCACCTTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCTTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |