Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | I6L33_RS00040 | Genome accession | NZ_CP077249 |
| Coordinates | 24663..24983 (+) | Length | 106 a.a. |
| NCBI ID | WP_216973348.1 | Uniprot ID | - |
| Organism | Aeromonas sp. FDAARGOS 1403 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 19663..29983
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L33_RS00015 (I6L33_00015) | - | 20302..20937 (-) | 636 | WP_010636289.1 | hemolysin III family protein | - |
| I6L33_RS00020 (I6L33_00020) | - | 21155..22660 (+) | 1506 | WP_010636288.1 | pyridoxal-dependent decarboxylase | - |
| I6L33_RS00025 (I6L33_00025) | - | 22765..23328 (+) | 564 | WP_117405931.1 | septation protein A | - |
| I6L33_RS00030 (I6L33_00030) | - | 23353..23649 (+) | 297 | WP_005309589.1 | YciI family protein | - |
| I6L33_RS00035 (I6L33_00035) | cysQ | 23726..24496 (-) | 771 | WP_181969533.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| I6L33_RS00040 (I6L33_00040) | comEA | 24663..24983 (+) | 321 | WP_216973348.1 | ComEA family DNA-binding protein | Machinery gene |
| I6L33_RS00045 (I6L33_00045) | galU | 25078..25989 (+) | 912 | WP_005309577.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| I6L33_RS00050 (I6L33_00050) | - | 26203..27600 (+) | 1398 | WP_017783362.1 | peptide MFS transporter | - |
| I6L33_RS00055 (I6L33_00055) | - | 27673..28644 (-) | 972 | WP_042051921.1 | response regulator | - |
| I6L33_RS00060 (I6L33_00060) | - | 29001..29678 (+) | 678 | WP_005309566.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11154.97 Da Isoelectric Point: 9.6021
>NTDB_id=580296 I6L33_RS00040 WP_216973348.1 24663..24983(+) (comEA) [Aeromonas sp. FDAARGOS 1403]
MNYKTLTATLLLSCLPLLSQPLLAADKPAATPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLANVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAATPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLANVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=580296 I6L33_RS00040 WP_216973348.1 24663..24983(+) (comEA) [Aeromonas sp. FDAARGOS 1403]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCACACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCAATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCACACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCAATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
54.545 |
100 |
0.566 |
| comEA | Vibrio cholerae C6706 |
54.545 |
100 |
0.566 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
42.857 |
92.453 |
0.396 |
| comEA | Legionella pneumophila str. Paris |
42.857 |
92.453 |
0.396 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |