Detailed information NTG0580087

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: I6L27_RS16530
• Genome accession: NZ_CP077232
• Coordinates: 3506291..3507349 (+)
• Length: 352 a.a.
• NCBI ID: WP_057104815.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain FDAARGOS 1397
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3501291..3512349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L27_RS16515 (I6L27_16520)	-	3502394..3502726 (+)	333	WP_216967669.1	DUF7709 family protein	-
I6L27_RS16520 (I6L27_16525)	rrmA	3502729..3503553 (+)	825	WP_081033599.1	putative RNA methyltransferase	-
I6L27_RS16525 (I6L27_16530)	ponA	3503569..3506130 (-)	2562	WP_125698047.1	penicillin-binding protein PBP1a	-
I6L27_RS16530 (I6L27_16535)	comM	3506291..3507349 (+)	1059	WP_057104815.1	pilus assembly protein PilM	Machinery gene
I6L27_RS16535 (I6L27_16540)	pilN	3507349..3507990 (+)	642	WP_016143661.1	PilN domain-containing protein	Machinery gene
I6L27_RS16540 (I6L27_16545)	pilO	3507987..3508766 (+)	780	WP_016143660.1	type 4a pilus biogenesis protein PilO	Machinery gene
I6L27_RS16545 (I6L27_16550)	pilP	3508778..3509305 (+)	528	WP_216967670.1	pilus assembly protein PilP	Machinery gene
I6L27_RS16550 (I6L27_16555)	pilQ	3509369..3511534 (+)	2166	WP_216967671.1	type IV pilus secretin PilQ family protein	Machinery gene
I6L27_RS16555 (I6L27_16560)	aroK	3511546..3512115 (+)	570	WP_016142884.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39059.64 Da
• Isoelectric Point: 4.4217

>NTDB_id=580087 I6L27_RS16530 WP_057104815.1 3506291..3507349(+) (comM) [Acinetobacter pittii strain FDAARGOS 1397]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPQTSNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDIQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=580087 I6L27_RS16530 WP_057104815.1 3506291..3507349(+) (comM) [Acinetobacter pittii strain FDAARGOS 1397]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTGGAAAGCTATGCTTTAACACCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCTGAAGCAGTTGCAGAAGCTTTGGAAAGGGCGATGAATTTAGCAAATCCCCAAACCAGTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAACGATGATGAGCGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTGGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CAAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACGCGCACAGAAAATGTTGAAACACGCGTAGAAGTACTGGAACTG
GTAGATTTAACGCCTAAACTTGCTGATGTTGAGAGTTATGCTGTCGAGCGTGCTTTTAGTGTATTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATTGGCCATACCATGACCACATTATCGGTTATGCAAAATGGTAAAATCA
TTTATACCCGTGAACAAGTCTTTGGTGGCAAACAGCTTACTTTGGAAATTCAAAGCCGTTATGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCAGGCG
GAAATGCCAATATTCCAGGGCTTGCTAAATTGTTGCAACAAAAACTTGGTTACCGAGTCACTATTGCCAACCCATTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACATTCAAAAAATTGAAAATGATGCCTCATCACTAATGGTGGCGTGTGGCTTGGC
CTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	96.023	100	0.96
pilM	Acinetobacter baumannii D1279779	96.023	100	0.96
comM	Acinetobacter baylyi ADP1	81.818	100	0.818
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42