Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   SPYKS030_RS06035 Genome accession   NZ_AP018337
Coordinates   1113691..1113879 (-) Length   62 a.a.
NCBI ID   WP_011054546.1    Uniprot ID   A0A0H2UUN1
Organism   Streptococcus pyogenes strain KS030     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1108691..1118879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYKS030_RS06010 (SPYKS030_11260) - 1110491..1110862 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  SPYKS030_RS06015 (SPYKS030_11270) - 1110862..1111560 (+) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  SPYKS030_RS06020 (SPYKS030_11280) - 1111570..1112355 (+) 786 WP_002984433.1 hypothetical protein -
  SPYKS030_RS06025 (SPYKS030_11290) - 1112486..1113100 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  SPYKS030_RS06035 (SPYKS030_11300) prx 1113691..1113879 (-) 189 WP_011054546.1 hypothetical protein Regulator
  SPYKS030_RS06040 (SPYKS030_11310) entC3 1113992..1114774 (-) 783 WP_002988472.1 enterotoxin type C3 EntC3 -
  SPYKS030_RS06045 (SPYKS030_11320) - 1114987..1116111 (-) 1125 WP_011054547.1 Fic family protein -
  SPYKS030_RS06050 (SPYKS030_11330) - 1116249..1117457 (-) 1209 WP_011054548.1 glucosaminidase domain-containing protein -
  SPYKS030_RS06055 (SPYKS030_11340) - 1117573..1117800 (-) 228 WP_011054444.1 phage holin -
  SPYKS030_RS06060 (SPYKS030_11350) - 1117797..1118069 (-) 273 WP_011017397.1 hypothetical protein -
  SPYKS030_RS06065 (SPYKS030_11360) - 1118081..1118713 (-) 633 WP_011054443.1 hypothetical protein -

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7226.17 Da        Isoelectric Point: 3.9947

>NTDB_id=57982 SPYKS030_RS06035 WP_011054546.1 1113691..1113879(-) (prx) [Streptococcus pyogenes strain KS030]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=57982 SPYKS030_RS06035 WP_011054546.1 1113691..1113879(-) (prx) [Streptococcus pyogenes strain KS030]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UUN1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS315

84.746

95.161

0.806

  prx Streptococcus pyogenes MGAS8232

84.483

93.548

0.79

  prx Streptococcus pyogenes MGAS315

82.759

93.548

0.774

  prx Streptococcus pyogenes MGAS315

77.966

95.161

0.742

  prx Streptococcus pyogenes MGAS315

87.805

66.129

0.581

  prx Streptococcus pyogenes MGAS315

76.19

67.742

0.516


Multiple sequence alignment