Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   CTB89_RS00130 Genome accession   NZ_AP017891
Coordinates   29985..30785 (+) Length   266 a.a.
NCBI ID   WP_020976813.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GN3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24985..35785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CTB89_RS00115 walK 25654..27480 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  CTB89_RS00120 yycH 27473..28807 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  CTB89_RS00125 yycI 28808..29596 (+) 789 WP_001104161.1 two-component system regulatory protein YycI -
  CTB89_RS00130 vicX 29985..30785 (+) 801 WP_020976813.1 MBL fold metallo-hydrolase Regulator
  CTB89_RS00135 adsA 31012..33324 (+) 2313 WP_064133497.1 LPXTG-anchored adenosine synthase AdsA -
  CTB89_RS00140 rlmH 33692..34171 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CTB89_RS14435 - 34270..34854 (+) 585 WP_020976816.1 dsDNA nuclease domain-containing protein -
  CTB89_RS14440 - 34802..35206 (+) 405 WP_020976817.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.54 Da        Isoelectric Point: 6.3392

>NTDB_id=57464 CTB89_RS00130 WP_020976813.1 29985..30785(+) (vicX) [Staphylococcus aureus strain GN3]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDIESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=57464 CTB89_RS00130 WP_020976813.1 29985..30785(+) (vicX) [Staphylococcus aureus strain GN3]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAGGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATATTGAATCGTTTAATGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTGACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGTCACGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477

Multiple sequence alignment