Detailed information NTG0567391

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: KIV12_RS05270
• Genome accession: NZ_CP075052
• Coordinates: 1092653..1093339 (+)
• Length: 228 a.a.
• NCBI ID: WP_217967790.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain LZP 02
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1087653..1098339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIV12_RS05245 (KIV12_05245)	degS	1087816..1088991 (+)	1176	WP_217967787.1	sensor histidine kinase	Regulator
KIV12_RS05250 (KIV12_05250)	degU	1089056..1089746 (+)	691	Protein_1009	two-component system response regulator DegU	-
KIV12_RS05255 (KIV12_05255)	-	1089957..1090799 (+)	843	WP_024719242.1	DegV family protein	-
KIV12_RS05260 (KIV12_05260)	comFA	1090919..1092298 (+)	1380	WP_217967788.1	DEAD/DEAH box helicase	Machinery gene
KIV12_RS05265 (KIV12_05265)	-	1092363..1092656 (+)	294	WP_217967789.1	late competence development ComFB family protein	-
KIV12_RS05270 (KIV12_05270)	comFC	1092653..1093339 (+)	687	WP_217967790.1	ComF family protein	Machinery gene
KIV12_RS05275 (KIV12_05275)	-	1093396..1093815 (+)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
KIV12_RS05280 (KIV12_05280)	flgM	1093895..1094158 (+)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
KIV12_RS05285 (KIV12_05285)	-	1094177..1094659 (+)	483	WP_007499977.1	flagellar protein FlgN	-
KIV12_RS05290 (KIV12_05290)	flgK	1094675..1096195 (+)	1521	WP_058336981.1	flagellar hook-associated protein FlgK	-
KIV12_RS05295 (KIV12_05295)	flgL	1096204..1097115 (+)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
KIV12_RS05300 (KIV12_05300)	-	1097162..1097740 (+)	579	WP_212359797.1	DUF6470 family protein	-
KIV12_RS05305 (KIV12_05305)	fliW	1097769..1098203 (+)	435	WP_025208061.1	flagellar assembly protein FliW	-

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26123.61 Da
• Isoelectric Point: 10.1473

>NTDB_id=567391 KIV12_RS05270 WP_217967790.1 1092653..1093339(+) (comFC) [Bacillus altitudinis strain LZP 02]
MICPICESHFVAAFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWDKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QSKQSKKRKNERLQQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDSGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=567391 KIV12_RS05270 WP_217967790.1 1092653..1093339(+) (comFC) [Bacillus altitudinis strain LZP 02]
TTGATTTGTCCGATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAGGATTGTTCAAGGTGGGATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGTAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACAACAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACTCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (162-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	37.991	100	0.382
comFC/cflB	Streptococcus mitis NCTC 12261	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae R6	36.681	100	0.368
comFC/cflB	Streptococcus pneumoniae TIGR4	36.681	100	0.368
comFC/cflB	Streptococcus pneumoniae Rx1	36.681	100	0.368
comFC/cflB	Streptococcus pneumoniae D39	36.681	100	0.368