Detailed information NTG0567389

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KIV12_RS05245
• Genome accession: NZ_CP075052
• Coordinates: 1087816..1088991 (+)
• Length: 391 a.a.
• NCBI ID: WP_217967787.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain LZP 02
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1082816..1093991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIV12_RS05225 (KIV12_05225)	tuaH	1083357..1084604 (+)	1248	WP_100324722.1	teichuronic acid biosynthesis protein TuaH	-
KIV12_RS05230 (KIV12_05230)	-	1084739..1085806 (+)	1068	WP_024719245.1	glycosyltransferase family 4 protein	-
KIV12_RS05235 (KIV12_05235)	-	1085844..1086941 (-)	1098	WP_217967786.1	LCP family protein	-
KIV12_RS05240 (KIV12_05240)	-	1086926..1087594 (-)	669	WP_017357860.1	YigZ family protein	-
KIV12_RS05245 (KIV12_05245)	degS	1087816..1088991 (+)	1176	WP_217967787.1	sensor histidine kinase	Regulator
KIV12_RS05250 (KIV12_05250)	degU	1089056..1089746 (+)	691	Protein_1009	two-component system response regulator DegU	-
KIV12_RS05255 (KIV12_05255)	-	1089957..1090799 (+)	843	WP_024719242.1	DegV family protein	-
KIV12_RS05260 (KIV12_05260)	comFA	1090919..1092298 (+)	1380	WP_217967788.1	DEAD/DEAH box helicase	Machinery gene
KIV12_RS05265 (KIV12_05265)	-	1092363..1092656 (+)	294	WP_217967789.1	late competence development ComFB family protein	-
KIV12_RS05270 (KIV12_05270)	comFC	1092653..1093339 (+)	687	WP_217967790.1	ComF family protein	Machinery gene
KIV12_RS05275 (KIV12_05275)	-	1093396..1093815 (+)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=567389 KIV12_RS05245 WP_217967787.1 1087816..1088991(+) (degS) [Bacillus altitudinis strain LZP 02]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTENERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTSKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=567389 KIV12_RS05245 WP_217967787.1 1087816..1088991(+) (degS) [Bacillus altitudinis strain LZP 02]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGATGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTTCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTACGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGGGATACAGAAAATGAAAGAATTGCTTCTCAGTTCGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTGAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACAAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAGTAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841