Detailed information NTG0567390

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: MKS87_RS14935
• Genome accession: NZ_CP092631
• Coordinates: 2837938..2838543 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain YB-15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2832938..2843543

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKS87_RS14905 (MKS87_14905)	-	2833751..2834140 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
MKS87_RS14910 (MKS87_14910)	yajC	2834197..2834463 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
MKS87_RS14915 (MKS87_14915)	tgt	2834500..2835645 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
MKS87_RS14920 (MKS87_14920)	queA	2835672..2836700 (-)	1029	WP_173614209.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
MKS87_RS14925 (MKS87_14925)	yrzS	2836730..2836930 (-)	201	WP_173614210.1	DUF2905 domain-containing protein	-
MKS87_RS14930 (MKS87_14930)	ruvB	2836923..2837927 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
MKS87_RS14935 (MKS87_14935)	ruvA	2837938..2838543 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
MKS87_RS14940 (MKS87_14940)	bofC	2838681..2839193 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
MKS87_RS14945 (MKS87_14945)	csbX	2839241..2840548 (-)	1308	WP_003246197.1	MFS transporter	-
MKS87_RS14950 (MKS87_14950)	iolG	2840619..2841644 (-)	1026	WP_173614211.1	inositol 2-dehydrogenase	-
MKS87_RS14955 (MKS87_14955)	yrzF	2841882..2842529 (+)	648	WP_173614212.1	phosphotransferase	-
MKS87_RS14960 (MKS87_14960)	-	2842575..2842697 (-)	123	WP_003229707.1	hypothetical protein	-
MKS87_RS14965 (MKS87_14965)	-	2842902..2843228 (+)	327	WP_181021371.1	DUF5412 family protein	-
MKS87_RS14970 (MKS87_14970)	-	2843235..2843375 (+)	141	WP_029727127.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=567390 MKS87_RS14935 WP_003229717.1 2837938..2838543(-) (ruvA) [Bacillus subtilis strain YB-15]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=567390 MKS87_RS14935 WP_003229717.1 2837938..2838543(-) (ruvA) [Bacillus subtilis strain YB-15]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACGGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCAGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408