Detailed information NTG0056445

Bioinformatically predicted

Overview

• Name: rcrP
• Type: Regulator
• Locus tag: H0I88_RS06575
• Genome accession: NC_020419
• Coordinates: 406870..406953 (+)
• Length: 27 a.a.
• NCBI ID: WP_095558980.1
• Uniprot ID: -
• Organism: Candidatus Endomicrobiellum trichonymphae
• Function: regulate competence (predicted from homology) Competence regulation

Genomic Context

Location: 401870..411953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0I88_RS01830 (TGRD_269)	-	401976..403172 (+)	1197	WP_015423280.1	FprA family A-type flavoprotein	-
H0I88_RS01835 (TGRD_270)	-	403309..403752 (+)	444	WP_015423281.1	desulfoferrodoxin family protein	-
H0I88_RS01840 (TGRD_271)	rbr	403953..404531 (+)	579	WP_015423282.1	rubrerythrin	-
H0I88_RS01845 (TGRD_272)	-	404827..405594 (-)	768	WP_015423283.1	RNA methyltransferase	-
H0I88_RS01850 (TGRD_RS01830)	-	405764..406042 (+)	279	WP_095558711.1	hypothetical protein	-
H0I88_RS01855 (TGRD_RS05870)	-	406511..406675 (+)	165	WP_158302777.1	hypothetical protein	-
H0I88_RS01860 (TGRD_RS05670)	-	406712..406849 (+)	138	WP_125266978.1	ABC transporter ATP-binding protein/permease	-
H0I88_RS06575	rcrP	406870..406953 (+)	84	WP_095558980.1	ATP-binding cassette domain-containing protein	Regulator
H0I88_RS01870 (TGRD_RS01840)	-	407057..407491 (+)	435	WP_095558712.1	ATP-binding cassette domain-containing protein	-
H0I88_RS01885 (TGRD_273)	-	408708..409385 (+)	678	WP_015423284.1	hypothetical protein	-
H0I88_RS06370	-	410169..410300 (+)	132	WP_269763548.1	hypothetical protein	-
H0I88_RS01890 (TGRD_RS01865)	-	410468..410671 (+)	204	WP_095558714.1	hypothetical protein	-
H0I88_RS05915	-	411110..411418 (+)	309	WP_198407714.1	DNA adenine methylase	-

Sequence

Protein

• Length: 27 a.a.
• Molecular weight: 2795.25 Da
• Isoelectric Point: 8.7564

>NTDB_id=56445 H0I88_RS06575 WP_095558980.1 406870..406953(+) (rcrP) [Candidatus Endomicrobiellum trichonymphae]
MVGAAGSGKSTLINLILRFYGVQNGEV

Nucleotide

• Length: 84 bp

>NTDB_id=56445 H0I88_RS06575 WP_095558980.1 406870..406953(+) (rcrP) [Candidatus Endomicrobiellum trichonymphae]
ATAGTTGGAGCCGCCGGTTCTGGAAAATCCACTTTAATAAATTTGATACTTAGATTTTATGGTGTTCAAAATGGGGAAGT
ATAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (1-27)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	55.556	100	0.556
rcrP	Streptococcus mutans UA159	57.692	96.296	0.556
amiE	Streptococcus salivarius strain HSISS4	44.828	100	0.481
amiE	Streptococcus thermophilus LMG 18311	44.828	100	0.481
amiE	Streptococcus thermophilus LMD-9	44.828	100	0.481
rcrQ	Streptococcus mutans UA159	48.148	100	0.481
comA	Streptococcus mitis SK321	46.154	96.296	0.444
comA	Streptococcus mitis NCTC 12261	46.154	96.296	0.444
comA	Streptococcus pneumoniae Rx1	46.154	96.296	0.444
comA	Streptococcus pneumoniae D39	46.154	96.296	0.444
comA	Streptococcus pneumoniae R6	46.154	96.296	0.444
comA	Streptococcus pneumoniae TIGR4	46.154	96.296	0.444
amiF	Streptococcus thermophilus LMG 18311	40.741	100	0.407
amiF	Streptococcus thermophilus LMD-9	40.741	100	0.407
amiF	Streptococcus salivarius strain HSISS4	40.741	100	0.407
comA	Streptococcus gordonii str. Challis substr. CH1	40.741	100	0.407
comYA	Streptococcus gordonii str. Challis substr. CH1	47.826	85.185	0.407
comB4	Helicobacter pylori 26695	58.824	62.963	0.37
pptA	Streptococcus thermophilus LMD-9	37.037	100	0.37
pptA	Streptococcus salivarius strain HSISS4	37.037	100	0.37
adcC	Streptococcus gordonii str. Challis substr. CH1	37.037	100	0.37