Detailed information NTG0558796

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: KCL43_RS08580
• Genome accession: NZ_CP073275
• Coordinates: 1788496..1789086 (-)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. zooepidemicus strain IN-6992
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1783496..1794086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KCL43_RS10555	-	1783522..1783667 (+)	146	Protein_1662	ISL3 family transposase	-
KCL43_RS08545 (KCL43_08545)	rsmI	1783838..1784704 (-)	867	WP_012516194.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
KCL43_RS08550 (KCL43_08550)	yabA	1784709..1785032 (-)	324	WP_012516195.1	DNA replication initiation control protein YabA	-
KCL43_RS08555 (KCL43_08555)	ricT	1785025..1785825 (-)	801	WP_043041048.1	regulatory iron-sulfur-containing complex subunit RicT	-
KCL43_RS08560 (KCL43_08560)	-	1785822..1786697 (-)	876	WP_021321087.1	DNA polymerase III subunit delta'	-
KCL43_RS08565 (KCL43_08565)	tmk	1786711..1787346 (-)	636	WP_159334652.1	dTMP kinase	-
KCL43_RS08570 (KCL43_08570)	-	1787660..1787944 (-)	285	WP_012677457.1	YlbG family protein	-
KCL43_RS08575 (KCL43_08575)	-	1787945..1788391 (-)	447	WP_159334653.1	YlbF family regulator	-
KCL43_RS08580 (KCL43_08580)	clpP	1788496..1789086 (-)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KCL43_RS08585 (KCL43_08585)	upp	1789317..1789946 (-)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
KCL43_RS08590 (KCL43_08590)	-	1790096..1791727 (-)	1632	WP_165623237.1	polysaccharide biosynthesis protein	-
KCL43_RS08595 (KCL43_08595)	-	1791813..1793258 (+)	1446	WP_165623236.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=558796 KCL43_RS08580 WP_012677455.1 1788496..1789086(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=558796 KCL43_RS08580 WP_012677455.1 1788496..1789086(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGACATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTCTAGCTATTGTGGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCCTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAGTACATGATTCACCAGCCTATGGGAGGCACAGGTGGTGGTACACAGCAGA
CAGATATGGCCATTGCGGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTACTGGATGAGCGCAGAAGAGACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566