Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   M3B_RS05010 Genome accession   NZ_AP014596
Coordinates   919220..919402 (+) Length   60 a.a.
NCBI ID   WP_029714017.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M3-b     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 914220..924402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M3B_RS04970 (M3B_1020) - 914637..915254 (+) 618 WP_010922094.1 DUF1366 domain-containing protein -
  M3B_RS04975 (M3B_1021) - 915264..915539 (+) 276 WP_002987582.1 hypothetical protein -
  M3B_RS04980 (M3B_1022) - 915536..915763 (+) 228 WP_000609113.1 phage holin -
  M3B_RS04985 (M3B_1023) - 915879..917087 (+) 1209 WP_011054445.1 glucosaminidase domain-containing protein -
  M3B_RS04990 (M3B_1024) - 917203..917559 (-) 357 WP_011054446.1 hypothetical protein -
  M3B_RS04995 (M3B_1025) - 917617..917856 (-) 240 WP_011054447.1 hypothetical protein -
  M3B_RS05000 (M3B_1026) - 918120..918371 (-) 252 WP_011054448.1 hypothetical protein -
  M3B_RS10055 (M3B_1027) - 918512..918658 (-) 147 WP_011054449.1 hypothetical protein -
  M3B_RS05005 (M3B_1028) - 918812..919021 (+) 210 WP_011054450.1 helix-turn-helix domain-containing protein -
  M3B_RS05010 prx 919220..919402 (+) 183 WP_029714017.1 hypothetical protein Regulator
  M3B_RS10060 - 919625..920031 (+) 407 Protein_942 nucleoside-diphosphate kinase -
  M3B_RS05025 (M3B_1030) lepA 920155..921987 (+) 1833 WP_011054451.1 translation elongation factor 4 -
  M3B_RS05030 (M3B_1031) slc2 922174..923094 (+) 921 WP_096404075.1 LPXTG-anchored collagen-like adhesin Scl2/SclB -
  M3B_RS05035 (M3B_1032) msrB 923247..923684 (+) 438 WP_011054453.1 peptide-methionine (R)-S-oxide reductase MsrB -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6890.90 Da        Isoelectric Point: 4.1947

>NTDB_id=55667 M3B_RS05010 WP_029714017.1 919220..919402(+) (prx) [Streptococcus pyogenes strain M3-b]
MLTYDEFKQAIDNGYITADTVAIVRKNGLIFDYVLPHESVRSCEIVIEERVAEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=55667 M3B_RS05010 WP_029714017.1 919220..919402(+) (prx) [Streptococcus pyogenes strain M3-b]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTAGCGATCGTGCGTAAAAA
CGGATTGATATTTGATTATGTGTTGCCGCACGAGTCTGTGAGATCGTGTGAGATTGTGATCGAGGAGAGGGTGGCGGAGG
TGATGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

80.952

70

0.567

  prx Streptococcus pyogenes MGAS315

78.571

70

0.55


Multiple sequence alignment