Detailed information NTG0555456

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: J8Y17_RS13725
• Genome accession: NZ_CP072769
• Coordinates: 2624308..2624889 (-)
• Length: 193 a.a.
• NCBI ID: WP_071728948.1
• Uniprot ID: A0A4S4HPB8
• Organism: Bacillus cereus strain BC07
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2619308..2629889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J8Y17_RS13695 (J8Y17_13695)	-	2619346..2620170 (-)	825	WP_088314294.1	PP2C family serine/threonine-protein phosphatase	-
J8Y17_RS13700 (J8Y17_13700)	-	2620154..2620639 (-)	486	WP_071728949.1	HIT family protein	-
J8Y17_RS13705 (J8Y17_13705)	-	2620742..2620915 (-)	174	WP_073524232.1	septum formation initiator	-
J8Y17_RS13710 (J8Y17_13710)	-	2621199..2622035 (-)	837	WP_001084766.1	proline/glycine betaine ABC transporter permease	-
J8Y17_RS13715 (J8Y17_13715)	-	2622028..2623233 (-)	1206	WP_000370609.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
J8Y17_RS13720 (J8Y17_13720)	-	2623405..2624262 (+)	858	WP_062921274.1	glycine betaine ABC transporter substrate-binding protein	-
J8Y17_RS13725 (J8Y17_13725)	clpP	2624308..2624889 (-)	582	WP_071728948.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
J8Y17_RS13730 (J8Y17_13730)	-	2624911..2625597 (-)	687	WP_000337491.1	RNA polymerase subunit sigma-70	-
J8Y17_RS13735 (J8Y17_13735)	-	2625741..2626061 (+)	321	WP_001125378.1	2Fe-2S iron-sulfur cluster-binding protein	-
J8Y17_RS13740 (J8Y17_13740)	rpiA	2626066..2626728 (+)	663	WP_071728946.1	ribose 5-phosphate isomerase A	-
J8Y17_RS13745 (J8Y17_13745)	-	2626836..2627270 (+)	435	WP_088314299.1	GNAT family N-acetyltransferase	-
J8Y17_RS13750 (J8Y17_13750)	-	2627401..2628768 (-)	1368	WP_088666929.1	lytic polysaccharide monooxygenase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21148.44 Da
• Isoelectric Point: 5.3394

>NTDB_id=555456 J8Y17_RS13725 WP_071728948.1 2624308..2624889(-) (clpP) [Bacillus cereus strain BC07]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVAKK

Nucleotide

• Length: 582 bp

>NTDB_id=555456 J8Y17_RS13725 WP_071728948.1 2624308..2624889(-) (clpP) [Bacillus cereus strain BC07]
ATGAATGCAATTCCATATGTTGTAGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
TCGTATTGTTATTATCGGTTCAGAAATAAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCAGGCGGATCAACGACAGCAGGTTTTGCCATATTAGATACG
ATGAATTTAATTAAACCAGACGTGCAAACGCTATGTATGGGCTTTGCAGCATCATTTGGTGCATTGCTATTATTATCAGG
TGCAAAAGGAAAGCGGTTTGCACTCCCAAATAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCAAAAGGGCAAGCGA
CGGAAATTGAAATCACAGCAAAAAGAATTTTAAAGTTAAAACATGATATTAATAAAATGATTGCAGAAAAAACAGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGATGTTGTTGCGAAAAAATAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

3D structure

• AlphaFold DB: A0A4S4HPB8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	67.368	98.446	0.663
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.667	97.927	0.653
clpP	Streptococcus pneumoniae Rx1	55.208	99.482	0.549
clpP	Streptococcus pneumoniae D39	55.208	99.482	0.549
clpP	Streptococcus pneumoniae R6	55.208	99.482	0.549
clpP	Streptococcus pneumoniae TIGR4	55.208	99.482	0.549
clpP	Streptococcus pyogenes JRS4	55.556	97.927	0.544
clpP	Streptococcus pyogenes MGAS315	55.556	97.927	0.544
clpP	Streptococcus thermophilus LMG 18311	54.167	99.482	0.539
clpP	Streptococcus thermophilus LMD-9	54.167	99.482	0.539
clpP	Streptococcus mutans UA159	53.439	97.927	0.523
clpP	Lactococcus lactis subsp. cremoris KW2	50.794	97.927	0.497
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	49.735	97.927	0.487