Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   J7U23_RS06455 Genome accession   NZ_CP072435
Coordinates   1238855..1239043 (-) Length   62 a.a.
NCBI ID   WP_372589851.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24736     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1233855..1244043
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U23_RS06440 (J7U23_06380) uvrC 1235489..1237276 (-) 1788 WP_372589850.1 excinuclease ABC subunit UvrC -
  J7U23_RS06445 (J7U23_06385) - 1237336..1238031 (-) 696 Protein_1216 YjjG family noncanonical pyrimidine nucleotidase -
  J7U23_RS06450 (J7U23_06390) - 1238309..1238659 (+) 351 Protein_1217 serine dehydratase beta chain -
  J7U23_RS06455 (J7U23_06395) prx 1238855..1239043 (-) 189 WP_372589851.1 hypothetical protein Regulator
  J7U23_RS06460 (J7U23_06400) - 1239308..1239745 (-) 438 WP_372589852.1 hypothetical protein -
  J7U23_RS06465 - 1240008..1240115 (-) 108 Protein_1220 RNA-binding protein -
  J7U23_RS06470 (J7U23_06410) - 1240119..1240599 (-) 481 Protein_1221 NUDIX hydrolase -
  J7U23_RS06475 (J7U23_06415) - 1240948..1241904 (-) 957 WP_260214219.1 hypothetical protein -
  J7U23_RS06480 (J7U23_06420) - 1242093..1243031 (-) 939 WP_220016640.1 bile acid:sodium symporter family protein -
  J7U23_RS06485 (J7U23_06425) - 1243176..1243625 (-) 450 WP_179970925.1 cytidine deaminase -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7051.01 Da        Isoelectric Point: 4.6104

>NTDB_id=552929 J7U23_RS06455 WP_372589851.1 1238855..1239043(-) (prx) [Streptococcus thermophilus strain S24736]
MLTYAEFKEAMDKGFIKGDTVQIVRKNGKIHDYVLDGERVEPHETLSLEKVSDIIKELGEGE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=552929 J7U23_RS06455 WP_372589851.1 1238855..1239043(-) (prx) [Streptococcus thermophilus strain S24736]
ATGCTAACCTATGCTGAATTTAAAGAGGCTATGGACAAGGGTTTTATTAAAGGTGATACTGTCCAGATTGTCCGAAAGAA
TGGCAAGATCCATGACTACGTGTTAGATGGTGAACGAGTTGAGCCACACGAAACATTGAGTTTAGAAAAGGTATCGGATA
TAATAAAGGAACTAGGCGAGGGCGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

55.932

95.161

0.532
  prx Streptococcus pyogenes MGAS315

54.237

95.161

0.516
  prx Streptococcus pyogenes MGAS315

55.172

93.548

0.516
  prx Streptococcus pyogenes MGAS315

55.172

93.548

0.516
  prx Streptococcus pyogenes MGAS315

71.429

67.742

0.484
  prx Streptococcus pyogenes MGAS315

72.5

64.516

0.468
  prx Streptococcus pyogenes MGAS315

65.909

70.968

0.468