Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   J7U22_RS07520 Genome accession   NZ_CP072428
Coordinates   1451482..1451691 (-) Length   69 a.a.
NCBI ID   WP_002946147.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24749     
Function   processing and transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1446482..1456691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U22_RS07485 (J7U22_07460) - 1447481..1447792 (-) 312 WP_372588808.1 urease subunit beta -
  J7U22_RS07490 (J7U22_07465) - 1447804..1448106 (-) 303 WP_002886558.1 urease subunit gamma -
  J7U22_RS07495 (J7U22_07470) - 1448131..1448646 (-) 516 WP_002949547.1 AmiS/UreI family transporter -
  J7U22_RS07500 - 1449051..1449947 (+) 897 WP_224102957.1 urease cluster protein -
  J7U22_RS07505 - 1450187..1450471 (+) 285 WP_014727318.1 hypothetical protein -
  J7U22_RS07510 (J7U22_07480) - 1450434..1450751 (-) 318 WP_011225454.1 DUF805 domain-containing protein -
  J7U22_RS07515 (J7U22_07485) - 1450859..1451427 (-) 569 Protein_1456 ATP-binding cassette domain-containing protein -
  J7U22_RS07520 comA 1451482..1451691 (-) 210 WP_002946147.1 hypothetical protein Regulator
  J7U22_RS07525 (J7U22_07495) comA 1451713..1452003 (-) 291 WP_081004984.1 ABC transporter transmembrane domain-containing protein Regulator
  J7U22_RS07530 comA 1452034..1452444 (-) 411 WP_216593071.1 ABC transporter transmembrane domain-containing protein Regulator
  J7U22_RS07535 - 1452459..1452953 (-) 495 Protein_1460 cysteine peptidase family C39 domain-containing protein -
  J7U22_RS07540 (J7U22_07510) comR 1453128..1454027 (-) 900 WP_014607953.1 helix-turn-helix domain-containing protein Regulator
  J7U22_RS07545 (J7U22_07515) - 1454222..1454872 (-) 651 WP_011225447.1 phosphatase PAP2 family protein -
  J7U22_RS07550 (J7U22_07520) - 1454875..1455432 (-) 558 WP_002949523.1 ECF transporter S component -
  J7U22_RS07555 (J7U22_07525) - 1455744..1456253 (-) 510 WP_014607952.1 tRNA (cytidine(34)-2'-O)-methyltransferase -

Sequence

Protein


Download         Length: 69 a.a.        Molecular weight: 8157.54 Da        Isoelectric Point: 9.7339

>NTDB_id=552589 J7U22_RS07520 WP_002946147.1 1451482..1451691(-) (comA) [Streptococcus thermophilus strain S24749]
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ

Nucleotide


Download         Length: 210 bp        

>NTDB_id=552589 J7U22_RS07520 WP_002946147.1 1451482..1451691(-) (comA) [Streptococcus thermophilus strain S24749]
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Streptococcus gordonii str. Challis substr. CH1

54.167

100

0.565
  comA Streptococcus mitis NCTC 12261

52.778

100

0.551
  comA Streptococcus pneumoniae Rx1

51.389

100

0.536
  comA Streptococcus pneumoniae D39

51.389

100

0.536
  comA Streptococcus pneumoniae R6

51.389

100

0.536
  comA Streptococcus pneumoniae TIGR4

51.389

100

0.536
  comA Streptococcus mitis SK321

50

100

0.522
  comA/nlmT Streptococcus mutans UA159

44.286

100

0.449