Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   J7T78_RS04875 Genome accession   NZ_CP072427
Coordinates   941325..941483 (+) Length   52 a.a.
NCBI ID   WP_014608276.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24750     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 936325..946483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T78_RS04855 (J7T78_04840) - 936905..938563 (-) 1659 WP_014608275.1 NFACT family protein -
  J7T78_RS04860 (J7T78_04845) - 938862..939842 (+) 981 WP_011681102.1 hypothetical protein -
  J7T78_RS04865 (J7T78_04850) - 940148..940633 (+) 486 WP_014607832.1 NUDIX hydrolase -
  J7T78_RS04870 (J7T78_04855) - 940637..940828 (+) 192 WP_011681104.1 hypothetical protein -
  J7T78_RS04875 (J7T78_04860) prx 941325..941483 (+) 159 WP_014608276.1 hypothetical protein Regulator
  J7T78_RS04880 (J7T78_04865) - 941685..942353 (+) 669 WP_014621543.1 TraX family protein -
  J7T78_RS04885 (J7T78_04870) - 942357..942578 (+) 222 WP_224102972.1 conjugal transfer protein TraX -
  J7T78_RS04890 (J7T78_04875) - 942620..943168 (+) 549 WP_014608278.1 DJ-1 family glyoxalase III -
  J7T78_RS04895 (J7T78_04880) - 943439..944212 (+) 774 WP_011681108.1 dihydroorotate dehydrogenase electron transfer subunit -
  J7T78_RS04900 (J7T78_04885) - 944231..945178 (+) 948 WP_024704100.1 dihydroorotate dehydrogenase -
  J7T78_RS04905 (J7T78_04890) cas1 945317..946321 (+) 1005 WP_014727507.1 CRISPR-associated endonuclease Cas1 -

Sequence


Protein


Download         Length: 52 a.a.        Molecular weight: 5835.59 Da        Isoelectric Point: 4.6646

>NTDB_id=552521 J7T78_RS04875 WP_014608276.1 941325..941483(+) (prx) [Streptococcus thermophilus strain S24750]
MDNGFIKGDTVQIVRKNGKIHDYVLDGERVEPHEILSLEKVSDIIKELGGDN

Nucleotide


Download         Length: 159 bp        

>NTDB_id=552521 J7T78_RS04875 WP_014608276.1 941325..941483(+) (prx) [Streptococcus thermophilus strain S24750]
ATGGACAACGGTTTTATTAAAGGTGATACTGTCCAGATTGTCCGAAAGAATGGTAAGATCCATGACTACGTTTTAGACGG
TGAACGAGTTGAGCCACACGAAATATTGAGCTTAGAAAAGGTATCGGATATAATAAAAGAACTAGGCGGAGACAACTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

54.167

92.308

0.5

  prx Streptococcus pyogenes MGAS8232

53.061

94.231

0.5

  prx Streptococcus pyogenes MGAS315

51.02

94.231

0.481

  prx Streptococcus pyogenes MGAS315

50

92.308

0.462

  prx Streptococcus pyogenes MGAS315

71.875

61.538

0.442

  prx Streptococcus pyogenes MGAS315

61.765

65.385

0.404

  prx Streptococcus pyogenes MGAS315

70

57.692

0.404