Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   J5Z97_RS01710 Genome accession   NZ_CP072112
Coordinates   309281..309832 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M08500     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 304281..314832
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5Z97_RS01710 (J5Z97_01710) comX/sigX/comX2/sigX2 309281..309832 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  J5Z97_RS01715 (J5Z97_01715) - 310413..310940 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  J5Z97_RS01720 (J5Z97_01720) yqeH 310940..312058 (+) 1119 WP_002985994.1 ribosome biogenesis GTPase YqeH -
  J5Z97_RS01725 (J5Z97_01725) yhbY 312084..312392 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  J5Z97_RS01730 (J5Z97_01730) - 312461..313093 (+) 633 WP_063662070.1 nicotinate-nucleotide adenylyltransferase -
  J5Z97_RS01735 (J5Z97_01735) yqeK 313090..313683 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  J5Z97_RS01740 (J5Z97_01740) rsfS 313707..314060 (+) 354 WP_011017339.1 ribosome silencing factor -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=550468 J5Z97_RS01710 WP_010921894.1 309281..309832(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain M08500]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=550468 J5Z97_RS01710 WP_010921894.1 309281..309832(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain M08500]
ATGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTTCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.