Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | GEI7407_RS13270 | Genome accession | NC_019703 |
| Coordinates | 3261373..3261738 (+) | Length | 121 a.a. |
| NCBI ID | WP_015172702.1 | Uniprot ID | K9SA99 |
| Organism | Geitlerinema sp. PCC 7407 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3256373..3266738
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GEI7407_RS13255 (GEI7407_2663) | hmpF | 3257387..3259153 (-) | 1767 | WP_015172700.1 | pilus motility taxis protein HmpF | - |
| GEI7407_RS13260 (GEI7407_2664) | - | 3259595..3260869 (+) | 1275 | WP_015172701.1 | response regulator | - |
| GEI7407_RS13270 (GEI7407_2665) | pilH | 3261373..3261738 (+) | 366 | WP_015172702.1 | response regulator transcription factor | Machinery gene |
| GEI7407_RS13275 (GEI7407_2666) | - | 3261747..3262277 (+) | 531 | WP_015172703.1 | chemotaxis protein CheW | - |
| GEI7407_RS13280 (GEI7407_2667) | - | 3262481..3265555 (+) | 3075 | WP_015172704.1 | methyl-accepting chemotaxis protein | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13370.53 Da Isoelectric Point: 5.1744
>NTDB_id=54855 GEI7407_RS13270 WP_015172702.1 3261373..3261738(+) (pilH) [Geitlerinema sp. PCC 7407]
MSTVLVVEDSVTQREMITDLLKGSGLSVAVATDGVEALEQVQKHCPDLVVLDIVMPRMNGYEVCRRLKADPKTQNVPIVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
MSTVLVVEDSVTQREMITDLLKGSGLSVAVATDGVEALEQVQKHCPDLVVLDIVMPRMNGYEVCRRLKADPKTQNVPIVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
Nucleotide
Download Length: 366 bp
>NTDB_id=54855 GEI7407_RS13270 WP_015172702.1 3261373..3261738(+) (pilH) [Geitlerinema sp. PCC 7407]
ATGAGCACAGTTCTGGTTGTGGAAGACAGCGTCACGCAACGGGAAATGATCACCGACCTCCTCAAAGGAAGCGGTCTCAG
CGTAGCCGTCGCCACTGATGGTGTCGAAGCCTTGGAACAGGTGCAAAAGCACTGTCCAGACCTCGTCGTGCTGGATATCG
TCATGCCCCGCATGAACGGCTACGAAGTCTGTCGCCGCCTCAAAGCTGACCCCAAGACCCAAAATGTCCCTATTGTGATG
TGCTCCTCCAAGGGCGAAGAATTCGATCGCTACTGGGGCATGAAGCAGGGAGCCGATGCCTACATTGCCAAACCCTTTCA
GCCAACCGAGCTGGTAGGAACCGTTAAGCAACTACTGCGAGGGTAG
ATGAGCACAGTTCTGGTTGTGGAAGACAGCGTCACGCAACGGGAAATGATCACCGACCTCCTCAAAGGAAGCGGTCTCAG
CGTAGCCGTCGCCACTGATGGTGTCGAAGCCTTGGAACAGGTGCAAAAGCACTGTCCAGACCTCGTCGTGCTGGATATCG
TCATGCCCCGCATGAACGGCTACGAAGTCTGTCGCCGCCTCAAAGCTGACCCCAAGACCCAAAATGTCCCTATTGTGATG
TGCTCCTCCAAGGGCGAAGAATTCGATCGCTACTGGGGCATGAAGCAGGGAGCCGATGCCTACATTGCCAAACCCTTTCA
GCCAACCGAGCTGGTAGGAACCGTTAAGCAACTACTGCGAGGGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
75.207 |
100 |
0.752 |
| micA | Streptococcus pneumoniae Cp1015 |
40 |
99.174 |
0.397 |
| chpA | Acinetobacter baumannii strain A118 |
40.517 |
95.868 |
0.388 |
| pilG | Acinetobacter baumannii strain A118 |
40.351 |
94.215 |
0.38 |
| vicR | Streptococcus mutans UA159 |
38.333 |
99.174 |
0.38 |
| pilL-C | Synechocystis sp. PCC 6803 |
37.5 |
99.174 |
0.372 |