Detailed information NTG0054855

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SPYJRS4_RS05140
• Genome accession: NZ_AP012335
• Coordinates: 1048152..1049114 (-)
• Length: 320 a.a.
• NCBI ID: WP_002983995.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes JRS4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1043152..1054114

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPYJRS4_RS05125 (SPYJRS4_1068)	-	1043989..1044696 (-)	708	WP_011017939.1	class I SAM-dependent methyltransferase	-
SPYJRS4_RS05130 (SPYJRS4_1069)	-	1044762..1045958 (-)	1197	WP_047149492.1	OFA family MFS transporter	-
SPYJRS4_RS05135 (SPYJRS4_1070)	pepF	1046334..1048139 (-)	1806	WP_047149493.1	oligoendopeptidase F	Regulator
SPYJRS4_RS05140 (SPYJRS4_1071)	coiA	1048152..1049114 (-)	963	WP_002983995.1	competence protein CoiA	Machinery gene
SPYJRS4_RS05145 (SPYJRS4_1072)	-	1049410..1050126 (-)	717	WP_011184662.1	pseudouridine synthase	-
SPYJRS4_RS05150 (SPYJRS4_1073)	nagB	1050245..1050949 (-)	705	WP_021340443.1	glucosamine-6-phosphate deaminase	-
SPYJRS4_RS05155 (SPYJRS4_1074)	queA	1051151..1052179 (+)	1029	WP_011184664.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
SPYJRS4_RS05160 (SPYJRS4_1075)	-	1052186..1053406 (+)	1221	WP_011184665.1	DUF3114 domain-containing protein	-
SPYJRS4_RS05165 (SPYJRS4_1076)	-	1053520..1054110 (-)	591	WP_011184666.1	serine hydrolase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37801.25 Da
• Isoelectric Point: 10.2848

>NTDB_id=54855 SPYJRS4_RS05140 WP_002983995.1 1048152..1049114(-) (coiA) [Streptococcus pyogenes JRS4]
MTKILTALDGKNQLISLVTQPISTKPPFRCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAENESEEHLTLKAKLYTSLV
RTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKRTKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSS
SLGFHLWELDAAANLLRLKYLIHEDLFGKVSYLTKTISLDHNIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHP
KWLRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKKVQTLFSPKYYVKMDSNRK

Nucleotide

• Length: 963 bp

>NTDB_id=54855 SPYJRS4_RS05140 WP_002983995.1 1048152..1049114(-) (coiA) [Streptococcus pyogenes JRS4]
GTGACAAAAATATTAACCGCTTTAGATGGTAAGAATCAGCTCATTTCGCTAGTAACTCAGCCTATTTCAACGAAACCGCC
TTTTCGTTGCCCAGCTTGCAAATCTCCTGTTCGCTTGCGTCAGGGGACAATTAGACGACCTCATTTTGCCCATGTACAAC
TAGCTCATTGTCAATTCCAAGCAGAAAATGAATCTGAGGAACATTTGACGTTGAAGGCAAAACTTTACACCAGTTTAGTC
CGAACAGAAGCTGTCTGTATTGAAAAATATCTTCCTGAGCTGCAACAGATAGCAGACCTTTGGGTGAATGATAAGTTAGC
CTTAGAAATTCAGTGCAGTCCCTTGCCAGTTGAGCGTCTAAAGAAACGCACCAAAGCCTATCAAGAAAAGGGGTATCCGG
TACGATGGTTACTGGGAAGAAAATTGTGGCTTAACACTCACTTAACTGCTTTGCAAAAACAGTTTCTTTACTTTTCATCT
AGTTTGGGCTTTCATTTGTGGGAGCTGGATGCAGCTGCAAATCTGCTACGTCTCAAATATTTAATCCATGAAGACTTATT
TGGTAAGGTAAGTTACCTAACCAAAACCATTTCTTTAGACCATAATATTATGGAAATGTTTCGGTTACCCTATCAGCAAG
AAATCCTTTATTCTTATCAGAAAAAAATGACTGTGAACCTATCTAAAAGAATACAAAGAGCTCTTTTAGCTAGACACCCG
AAATGGCTACGACGACAAGAAAAGGCTTACTTATCAGGCTATAATTTACTTATGTTAACAACTGATGCTTTTTATCCTCA
ATGGAGACCAGTTCAATCTTCCAGCGGTTTTTGTCAAATTAAAGGAAATCTTCGCCCTTATTATGAAAGTTTTAAAGTCT
ATTACAAAAAAGAAAAGGATAAGAAGGTGCAAACGCTTTTTTCACCAAAATATTATGTTAAAATGGATAGTAATAGAAAA
TAA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-265)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	42.903	96.875	0.416
coiA	Streptococcus pneumoniae Rx1	41.613	96.875	0.403
coiA	Streptococcus pneumoniae D39	41.613	96.875	0.403
coiA	Streptococcus pneumoniae R6	41.613	96.875	0.403
coiA	Streptococcus pneumoniae TIGR4	41.613	96.875	0.403
coiA	Lactococcus lactis subsp. cremoris KW2	39.329	100	0.403