Detailed information NTG0548013

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: EXW53_RS13330
• Genome accession: NZ_CP071808
• Coordinates: 2599054..2599635 (-)
• Length: 193 a.a.
• NCBI ID: WP_070128426.1
• Uniprot ID: -
• Organism: Bacillus mycoides strain JAS014
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2594054..2604635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXW53_RS13300 (EXW53_13330)	-	2594628..2595119 (-)	492	WP_070170223.1	HIT family protein	-
EXW53_RS13305 (EXW53_13335)	-	2595258..2595443 (-)	186	WP_252188359.1	septum formation initiator	-
EXW53_RS13310 (EXW53_13340)	-	2595659..2595895 (+)	237	WP_098776168.1	hypothetical protein	-
EXW53_RS13315 (EXW53_13345)	-	2595944..2596780 (-)	837	WP_086423198.1	proline/glycine betaine ABC transporter permease	-
EXW53_RS13320 (EXW53_13350)	-	2596773..2597978 (-)	1206	WP_000370622.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
EXW53_RS13325 (EXW53_13355)	-	2598150..2599007 (+)	858	WP_215556935.1	glycine betaine ABC transporter substrate-binding protein	-
EXW53_RS13330 (EXW53_13360)	clpP	2599054..2599635 (-)	582	WP_070128426.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
EXW53_RS13335 (EXW53_13365)	-	2599656..2600342 (-)	687	WP_002161519.1	RNA polymerase subunit sigma-70	-
EXW53_RS13340 (EXW53_13370)	-	2600486..2600806 (+)	321	WP_215556936.1	2Fe-2S iron-sulfur cluster-binding protein	-
EXW53_RS13345 (EXW53_13375)	rpiA	2600811..2601473 (+)	663	WP_215556937.1	ribose 5-phosphate isomerase A	-
EXW53_RS13350 (EXW53_13380)	-	2601586..2602020 (+)	435	WP_002200256.1	GNAT family N-acetyltransferase	-
EXW53_RS13355 (EXW53_13385)	-	2602262..2603986 (-)	1725	WP_215556938.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21246.58 Da
• Isoelectric Point: 5.1039

>NTDB_id=548013 EXW53_RS13330 WP_070128426.1 2599054..2599635(-) (clpP) [Bacillus mycoides strain JAS014]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQPLGGVKGQATEIEITAKRILKLKHDINKIIAERTGQ
PVEKVAHDTERDYFMTAEEAKEYGIVDAVIEKK

Nucleotide

• Length: 582 bp

>NTDB_id=548013 EXW53_RS13330 WP_070128426.1 2599054..2599635(-) (clpP) [Bacillus mycoides strain JAS014]
ATGAATGCAATTCCTTACGTAGTAGAACAAACGAAATTAGGAGAACGCTCCTATGATATATATTCAAGATTATTAAAAGA
CCGAATTATTATGATTGGTTCAGAAATTAACGATCAAGTTGCAAGCAGTGTAGTAGCACAATTATTATTTTTAGAAGCGG
AAGATGCAGAAAAAGATATATTCCTGTATATCAATAGTCCGGGCGGTTCAACGACAGCGGGATTTGCAATATTGGATACG
ATGAACCTTATTAAACCAGATGTGCAAACACTTTGTATGGGCTTTGCGGCATCATTTGGTGCGCTTTTACTATTAGCTGG
CGCAAAGGGAAAAAGATTTGCGCTCCCTAACAGTGAAATCATGATTCATCAACCGCTCGGCGGTGTAAAAGGGCAAGCGA
CGGAGATTGAAATTACAGCAAAAAGAATATTAAAGTTAAAACACGATATTAATAAAATTATCGCAGAGCGAACAGGGCAA
CCAGTTGAAAAAGTAGCACATGATACAGAAAGAGATTATTTTATGACGGCAGAAGAAGCGAAGGAATATGGAATTGTCGA
TGCAGTTATTGAGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	69.474	98.446	0.684
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	69.841	97.927	0.684
clpP	Streptococcus pneumoniae Rx1	57.672	97.927	0.565
clpP	Streptococcus pneumoniae D39	57.672	97.927	0.565
clpP	Streptococcus pneumoniae R6	57.672	97.927	0.565
clpP	Streptococcus pneumoniae TIGR4	57.672	97.927	0.565
clpP	Streptococcus thermophilus LMG 18311	56.614	97.927	0.554
clpP	Streptococcus thermophilus LMD-9	56.614	97.927	0.554
clpP	Streptococcus pyogenes JRS4	55.208	99.482	0.549
clpP	Streptococcus pyogenes MGAS315	55.208	99.482	0.549
clpP	Streptococcus mutans UA159	54.211	98.446	0.534
clpP	Lactococcus lactis subsp. cremoris KW2	51.562	99.482	0.513
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	51.042	99.482	0.508