Detailed information NTG0547053

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: J1N58_RS07655
• Genome accession: NZ_CP071697
• Coordinates: 1638327..1638938 (-)
• Length: 203 a.a.
• NCBI ID: WP_228377545.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 1112S
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1633327..1643938

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J1N58_RS07630 (J1N58_07630)	-	1633830..1634594 (-)	765	WP_024376797.1	ABC transporter ATP-binding protein	-
J1N58_RS07635 (J1N58_07635)	-	1634594..1635541 (-)	948	WP_029996528.1	branched-chain amino acid ABC transporter permease	-
J1N58_RS07640 (J1N58_07640)	-	1635544..1636431 (-)	888	WP_044688402.1	branched-chain amino acid ABC transporter permease	-
J1N58_RS07645 (J1N58_07645)	-	1636627..1637796 (-)	1170	WP_100881557.1	ABC transporter substrate-binding protein	-
J1N58_RS07650 (J1N58_07650)	-	1637928..1638200 (-)	273	WP_024381609.1	YlbG family protein	-
J1N58_RS07655 (J1N58_07655)	clpP	1638327..1638938 (-)	612	WP_228377545.1	ATP-dependent Clp protease proteolytic subunit	Regulator
J1N58_RS07660 (J1N58_07660)	upp	1639034..1639663 (-)	630	WP_012027487.1	uracil phosphoribosyltransferase	-
J1N58_RS07665 (J1N58_07665)	-	1639746..1641362 (-)	1617	WP_207560247.1	alpha-glucosidase	-
J1N58_RS07670 (J1N58_07670)	gtfA	1641435..1642883 (-)	1449	WP_024404847.1	sucrose phosphorylase	-
J1N58_RS07675 (J1N58_07675)	-	1642953..1643783 (-)	831	WP_009910491.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 22359.75 Da
• Isoelectric Point: 6.7324

>NTDB_id=547053 J1N58_RS07655 WP_228377545.1 1638327..1638938(-) (clpP) [Streptococcus suis strain 1112S]
MSKRSNFMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGL
AIVDTMNFIKADVQTIVMGTAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKI
LADNSGKTVKQIHKDAERDYWMTAEETLAYGFIDQIMDNTKVK

Nucleotide

• Length: 612 bp

>NTDB_id=547053 J1N58_RS07655 WP_228377545.1 1638327..1638938(-) (clpP) [Streptococcus suis strain 1112S]
ATCTCGAAAAGGAGTAATTTTATGATTCCAGTAGTTATTGAACAAACTAGCCGTGGTGAGCGTTCTTATGATATTTACTC
ACGCCTTTTGAAAGACCGTATTATCATGTTGACAGGACCAGTTGAGGACAACATGGCAAACTCTATCATTGCACAATTGC
TTTTCCTTGATGCCCAAGACCCTACAAAGGATATTTACCTCTATGTTAATACGCCAGGAGGATCGGTGTCAGCAGGTCTT
GCCATTGTAGACACGATGAATTTCATTAAAGCTGATGTTCAAACCATCGTTATGGGAACAGCTGCCAGCATGGGAACCAT
CATTGCATCAAGCGGTGCCAAGGGCAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAGCCAATGGGCGGAA
CAGGTGGTGGCACTCAGCAAACAGACATGGCTATTGCAGCAGAACACTTGCTCAAAACCCGTAACAAATTGGAAAAAATC
TTGGCTGACAATTCAGGTAAAACAGTGAAACAAATCCACAAGGATGCCGAACGCGATTACTGGATGACAGCAGAAGAAAC
ACTAGCTTACGGATTTATTGACCAGATTATGGACAATACAAAAGTCAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (18-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	91.837	96.552	0.887
clpP	Streptococcus pyogenes MGAS315	91.837	96.552	0.887
clpP	Streptococcus mutans UA159	90.306	96.552	0.872
clpP	Streptococcus pneumoniae R6	88.718	96.059	0.852
clpP	Streptococcus pneumoniae Rx1	88.718	96.059	0.852
clpP	Streptococcus pneumoniae D39	88.718	96.059	0.852
clpP	Streptococcus pneumoniae TIGR4	88.718	96.059	0.852
clpP	Streptococcus thermophilus LMG 18311	88.265	96.552	0.852
clpP	Streptococcus thermophilus LMD-9	88.265	96.552	0.852
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	83.756	97.044	0.813
clpP	Lactococcus lactis subsp. cremoris KW2	83.249	97.044	0.808
clpP	Bacillus subtilis subsp. subtilis str. 168	57.653	96.552	0.557
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	95.074	0.552