Detailed information NTG0544917

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: J0W32_RS09200
• Genome accession: NZ_CP071317
• Coordinates: 1950833..1952188 (-)
• Length: 451 a.a.
• NCBI ID: WP_171526345.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain GXNN15X4
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 1945833..1957188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J0W32_RS09185 (J0W32_09185)	lptG	1946887..1947957 (+)	1071	WP_127801557.1	LPS export ABC transporter permease LptG	-
J0W32_RS09190 (J0W32_09190)	gpmI	1948076..1949623 (+)	1548	WP_005181570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
J0W32_RS09195 (J0W32_09195)	-	1949647..1950816 (+)	1170	WP_005181572.1	S41 family peptidase	-
J0W32_RS09200 (J0W32_09200)	pilR	1950833..1952188 (-)	1356	WP_171526345.1	sigma-54-dependent transcriptional regulator	Regulator
J0W32_RS09205 (J0W32_09205)	pilS	1952260..1953828 (-)	1569	WP_180006911.1	sensor histidine kinase	Regulator
J0W32_RS09210 (J0W32_09210)	-	1953843..1954478 (-)	636	WP_005181577.1	response regulator	-
J0W32_RS09215 (J0W32_09215)	-	1954696..1955778 (+)	1083	WP_127799456.1	serine hydrolase	-
J0W32_RS09220 (J0W32_09220)	thrC	1955871..1957016 (-)	1146	WP_005181581.1	threonine synthase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50603.31 Da
• Isoelectric Point: 6.7145

>NTDB_id=544917 J0W32_RS09200 WP_171526345.1 1950833..1952188(-) (pilR) [Acinetobacter indicus strain GXNN15X4]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPEADPATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=544917 J0W32_RS09200 WP_171526345.1 1950833..1952188(-) (pilR) [Acinetobacter indicus strain GXNN15X4]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAAGCACGTCAGCTGCTGTCCAG
TCATCACTATGACGCCTGCATCACCGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCACTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTACTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCACATAGTCAGGAAGCAGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTACCGATTCAGCAACTGCGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTAGTGGCCAAT
CTGGTGCATCGCCTCAGCAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGCGCGATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGCCTGATTCAGTCAGCACACG
GCGGTAGCCTGTTTCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAACTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATTAGTGCCAGCCATCAGGACCTGGAAGC
GTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTAATGGATATTGTGCTGCCACCGCTACGTG
AGCGCGGTCAGGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTACGCAATATCATTGAACG
CGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCACATCTGCAGACCGCACCCTTACGCAAAATGGCACCGCTGG
CCGAGCCAGAAGCTGACCCGGCAACACCGGTTACAGCTGATGCCCTGCCCGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCACTGAATCTGACCCATTGGAACCGGACCCTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTAAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-97)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.058	100	0.741
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501