Detailed information NTG0544589

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J0J32_RS05080
• Genome accession: NZ_CP071285
• Coordinates: 1037013..1037882 (-)
• Length: 289 a.a.
• NCBI ID: WP_004257242.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain LG728
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1032013..1042882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J0J32_RS05065 (J0J32_05065)	-	1032990..1033211 (+)	222	WP_207144432.1	hypothetical protein	-
J0J32_RS05070 (J0J32_05070)	trmFO	1033284..1034627 (-)	1344	WP_004257249.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
J0J32_RS05075 (J0J32_05075)	topA	1034673..1036823 (-)	2151	WP_207144433.1	type I DNA topoisomerase	-
J0J32_RS05080 (J0J32_05080)	dprA	1037013..1037882 (-)	870	WP_004257242.1	DNA-processing protein DprA	Machinery gene
J0J32_RS05085 (J0J32_05085)	budA	1037969..1038667 (-)	699	WP_004257238.1	acetolactate decarboxylase	-
J0J32_RS05090 (J0J32_05090)	-	1038809..1040533 (-)	1725	WP_004257235.1	ABC transporter permease/substrate binding protein	-
J0J32_RS05095 (J0J32_05095)	-	1040526..1041728 (-)	1203	WP_004257230.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
J0J32_RS05100 (J0J32_05100)	-	1041933..1042553 (-)	621	WP_004257227.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32860.03 Da
• Isoelectric Point: 9.5626

>NTDB_id=544589 J0J32_RS05080 WP_004257242.1 1037013..1037882(-) (dprA) [Lactococcus garvieae strain LG728]
MIRNFEILRLKKAGMSNLGILKLIDYQERHEAKLTLRQLARIAEVKAVPNFIESYKSQDVKRLREQYKTFPSFSILDDIY
PEWLKEMYNPPTLLFYQGNLKLLNFPKLGFVGSREMSKEAPKITYKLIEELKQSFVIVSGLARGVDTSSHVAAIKQQTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLVGEPPLKFHFPERNRIIAGLSRGIIVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLITHGQDILDEFYLYGDNFLP

Nucleotide

• Length: 870 bp

>NTDB_id=544589 J0J32_RS05080 WP_004257242.1 1037013..1037882(-) (dprA) [Lactococcus garvieae strain LG728]
ATGATTAGAAATTTTGAAATATTGCGTTTGAAAAAAGCAGGAATGTCGAATCTAGGGATTTTGAAACTGATTGACTATCA
AGAGAGGCATGAAGCAAAACTTACTTTACGACAGTTAGCGAGGATCGCAGAAGTCAAAGCTGTCCCTAATTTTATTGAGA
GTTACAAGAGTCAGGATGTGAAACGACTTCGAGAGCAATATAAGACCTTCCCCTCCTTTTCCATCTTAGACGACATTTAT
CCTGAATGGCTGAAAGAAATGTATAATCCCCCGACCCTCCTTTTTTATCAAGGAAATCTTAAGTTGCTTAACTTCCCTAA
ACTCGGATTTGTCGGGAGCCGTGAGATGTCTAAGGAAGCACCTAAAATTACATACAAGCTTATTGAGGAATTAAAACAAA
GCTTTGTTATAGTGAGCGGGTTAGCACGCGGTGTTGACACTTCTAGTCATGTAGCTGCTATAAAGCAACAAACACCAACC
ATTGCTGTCATTGGTAACGGCTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAGTATTTAGCAACTCATGA
ATTGGTTTTATCAGAATACCTTGTAGGAGAGCCGCCCCTTAAGTTTCATTTCCCAGAGAGAAATAGAATCATTGCGGGTC
TTTCTCGTGGAATTATCGTTGTTGAAGCAAAGCAACGTAGCGGTAGCCTCATCACAAGTCGTTATGCCTTAGAGGGAAAT
AGAGAAGTCTTTGCTGTACCTGGAGATATTTTGAACAGAAATGCCTCTGGCTGTAATCAATTAATCCAGCAAGGTGCAGC
CAAGCTTATCACTCATGGTCAAGATATTTTGGATGAATTTTATTTATATGGGGATAATTTCCTTCCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (74-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.604	97.924	0.623
dprA	Streptococcus mutans UA159	56.318	95.848	0.54
dprA/cilB/dalA	Streptococcus pneumoniae D39	54.48	96.54	0.526
dprA/cilB/dalA	Streptococcus pneumoniae R6	54.48	96.54	0.526
dprA/cilB/dalA	Streptococcus mitis SK321	54.48	96.54	0.526
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	54.48	96.54	0.526
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	54.48	96.54	0.526
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.763	96.54	0.519
dprA	Haemophilus influenzae Rd KW20	37.329	100	0.377
dprA	Latilactobacillus sakei subsp. sakei 23K	39.35	95.848	0.377