Detailed information NTG0537043

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I6K89_RS00970
• Genome accession: NZ_CP069851
• Coordinates: 192305..193006 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain FDAARGOS_1359
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 187305..198006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6K89_RS00935 (I6K89_00935)	kdsB	187828..188589 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
I6K89_RS00940 (I6K89_00940)	-	188601..189581 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
I6K89_RS00945 (I6K89_00945)	-	189593..189934 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
I6K89_RS00950 (I6K89_00950)	-	189952..190725 (+)	774	WP_000497298.1	TatD family hydrolase	-
I6K89_RS00955 (I6K89_00955)	-	190763..191371 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
I6K89_RS00960 (I6K89_00960)	-	191381..191935 (+)	555	WP_000841373.1	type II secretion system protein	-
I6K89_RS00965 (I6K89_00965)	xcpV	191925..192305 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
I6K89_RS00970 (I6K89_00970)	xcpW	192305..193006 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I6K89_RS00975 (I6K89_00975)	gspK	193006..193965 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
I6K89_RS00980 (I6K89_00980)	-	194196..194792 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
I6K89_RS00985 (I6K89_00985)	ung	194843..195556 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
I6K89_RS00990 (I6K89_00990)	-	195553..196677 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
I6K89_RS00995 (I6K89_00995)	tadA	196684..197187 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
I6K89_RS01000 (I6K89_01000)	-	197257..197700 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=537043 I6K89_RS00970 WP_000594589.1 192305..193006(+) (xcpW) [Acinetobacter baumannii strain FDAARGOS_1359]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=537043 I6K89_RS00970 WP_000594589.1 192305..193006(+) (xcpW) [Acinetobacter baumannii strain FDAARGOS_1359]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996