Detailed information NTG0532737

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LLNCDO700_RS06560
• Genome accession: NZ_CP069179
• Coordinates: 1271960..1272808 (-)
• Length: 282 a.a.
• NCBI ID: WP_259691980.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain NCDO700
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1266960..1277808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLNCDO700_RS06545 (LLNCDO700_06535)	xerS	1267030..1268100 (+)	1071	WP_011835149.1	tyrosine recombinase XerS	-
LLNCDO700_RS06550 (LLNCDO700_06540)	trmFO	1268150..1269496 (-)	1347	WP_011835150.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
LLNCDO700_RS06555 (LLNCDO700_06545)	topA	1269568..1271694 (-)	2127	WP_259691981.1	type I DNA topoisomerase	-
LLNCDO700_RS06560 (LLNCDO700_06550)	dprA	1271960..1272808 (-)	849	WP_259691980.1	DNA-processing protein DprA	Machinery gene
LLNCDO700_RS06565 (LLNCDO700_06555)	-	1272956..1273336 (-)	381	WP_011835153.1	RidA family protein	-
LLNCDO700_RS06570 (LLNCDO700_06560)	budA	1273376..1274086 (-)	711	WP_011835154.1	acetolactate decarboxylase	-
LLNCDO700_RS06575 (LLNCDO700_06565)	ilvA	1274222..1275472 (-)	1251	WP_011835155.1	threonine ammonia-lyase IlvA	-
LLNCDO700_RS06580 (LLNCDO700_06570)	-	1275531..1276091 (-)	561	Protein_1272	ketol-acid reductoisomerase	-
LLNCDO700_RS06585 (LLNCDO700_06575)	-	1276111..1276314 (-)	204	Protein_1273	isocitrate/isopropylmalate family dehydrogenase	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31991.13 Da
• Isoelectric Point: 9.8385

>NTDB_id=532737 LLNCDO700_RS06560 WP_259691980.1 1271960..1272808(-) (dprA) [Lactococcus cremoris strain NCDO700]
MITNFDLFRWKKAGMINLGVNKLLKFFHKYDRKISLRQMGQVAQVKSIPNFIEQYKNQDVKKLRIDYKKFSSFSILDDLY
PERLREIYNPPVLIFYQENIDLLKNPKLAFVGSRLAGQSGIKAVQKIVTELNQSFTIVSGLAKGIDTASHLSAIKTKTPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEAKLRSGSLITCERALEEG
RDIFAIPGNIADGTSDGCNHLIQQGAKLVYQAQDILEEYLYN

Nucleotide

• Length: 849 bp

>NTDB_id=532737 LLNCDO700_RS06560 WP_259691980.1 1271960..1272808(-) (dprA) [Lactococcus cremoris strain NCDO700]
ATGATTACAAATTTTGATTTGTTTCGTTGGAAAAAAGCAGGAATGATCAATCTTGGTGTAAATAAGCTCTTAAAATTTTT
CCACAAATATGATAGAAAAATAAGCTTACGACAAATGGGACAAGTGGCTCAAGTCAAATCAATCCCTAACTTTATCGAAC
AATATAAAAATCAGGACGTAAAGAAACTCAGGATAGACTATAAAAAATTTTCCTCCTTTTCCATTCTTGATGACCTTTAT
CCCGAGCGTCTAAGAGAAATCTATAACCCACCCGTCTTAATTTTTTATCAGGAAAATATTGATTTATTAAAAAACCCTAA
ACTTGCCTTTGTTGGAAGCCGCCTAGCAGGTCAATCAGGGATAAAAGCTGTCCAAAAAATTGTGACAGAATTGAATCAAT
CCTTTACAATAGTAAGCGGACTTGCCAAAGGGATTGACACAGCCAGCCATCTGTCAGCAATTAAAACTAAAACACCAACA
ATTGCTGTTATTGGTACAGGATTGGATATTTTCTATCCACTAGAAAATCGTAAAATACAGGAATATCTAGCAAAAAATCA
ATTAGTTTTAAGTGAATATTCATTAGGCGAAAAACCACTTAAATACCACTTCCCAGAGCGCAATCGAATTATTGCTGGTC
TTTCACGGGGAGTTGTTGTCGTGGAAGCAAAATTAAGAAGTGGAAGTTTAATTACCTGTGAAAGGGCACTGGAAGAAGGA
AGAGATATCTTTGCCATCCCTGGAAATATTGCAGATGGAACATCTGATGGCTGTAATCATCTTATTCAACAAGGAGCAAA
ACTTGTTTATCAAGCTCAAGATATTTTAGAAGAATATTTGTACAATTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (69-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	97.872	100	0.979
dprA	Streptococcus mutans UA159	58.273	98.582	0.574
dprA/cilB/dalA	Streptococcus mitis SK321	55	99.291	0.546
dprA/cilB/dalA	Streptococcus pneumoniae R6	54.643	99.291	0.543
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	54.643	99.291	0.543
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	54.643	99.291	0.543
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	54.643	99.291	0.543
dprA/cilB/dalA	Streptococcus pneumoniae D39	54.643	99.291	0.543
dprA	Legionella pneumophila strain ERS1305867	38.768	97.872	0.379
dprA	Haemophilus influenzae Rd KW20	39.552	95.035	0.376