Detailed information NTG0532069

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: JNE45_RS16005
• Genome accession: NZ_CP069061
• Coordinates: 3138941..3139537 (+)
• Length: 198 a.a.
• NCBI ID: WP_007500118.1
• Uniprot ID: -
• Organism: Bacillus safensis strain F6
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3133941..3144537

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNE45_RS19290	-	3134368..3134523 (+)	156	WP_238409395.1	hypothetical protein	-
JNE45_RS15980 (JNE45_15980)	-	3134696..3135862 (-)	1167	WP_203128872.1	macrolide family glycosyltransferase	-
JNE45_RS15990 (JNE45_15990)	-	3136551..3137360 (-)	810	WP_095409620.1	DUF6270 domain-containing protein	-
JNE45_RS19295	-	3137771..3137914 (-)	144	WP_338017889.1	tyrosine-type recombinase/integrase	-
JNE45_RS19300	-	3137865..3138041 (-)	177	WP_223251027.1	hypothetical protein	-
JNE45_RS16005 (JNE45_16005)	clpP	3138941..3139537 (+)	597	WP_007500118.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
JNE45_RS16010 (JNE45_16010)	-	3139596..3140174 (-)	579	WP_095409621.1	TIGR00730 family Rossman fold protein	-
JNE45_RS16015 (JNE45_16015)	-	3140312..3140653 (+)	342	WP_203128873.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
JNE45_RS16020 (JNE45_16020)	-	3140680..3142302 (-)	1623	WP_203128874.1	SulP family inorganic anion transporter	-
JNE45_RS16025 (JNE45_16025)	-	3142341..3142931 (-)	591	WP_231120177.1	beta-class carbonic anhydrase	-
JNE45_RS16030 (JNE45_16030)	-	3143476..3144453 (+)	978	WP_111292206.1	2-hydroxyacid dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21846.03 Da
• Isoelectric Point: 4.6905

>NTDB_id=532069 JNE45_RS16005 WP_007500118.1 3138941..3139537(+) (clpP) [Bacillus safensis strain F6]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=532069 JNE45_RS16005 WP_007500118.1 3138941..3139537(+) (clpP) [Bacillus safensis strain F6]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTCGGCGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.434	100	0.934
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53