Detailed information NTG0530766

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: JM957_RS25710
• Genome accession: NZ_CP068724
• Coordinates: 5000709..5001290 (+)
• Length: 193 a.a.
• NCBI ID: WP_001049162.1
• Uniprot ID: A0A9W5QPC2
• Organism: Bacillus cereus strain AFA01
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4995709..5006290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JM957_RS25675	-	4996705..4996911 (+)	207	WP_000216166.1	DUF1657 domain-containing protein	-
JM957_RS25680	-	4997005..4997490 (+)	486	WP_001228545.1	YhcN/YlaJ family sporulation lipoprotein	-
JM957_RS25685	spoVAC	4997520..4997996 (+)	477	WP_000095399.1	stage V sporulation protein AC	-
JM957_RS25690	spoVAD	4997997..4999013 (+)	1017	WP_000938972.1	stage V sporulation protein AD	-
JM957_RS25695	spoVAE	4999010..4999360 (+)	351	WP_000575919.1	stage V sporulation protein AE	-
JM957_RS25700	-	4999372..4999578 (+)	207	WP_050279609.1	DUF1657 domain-containing protein	-
JM957_RS25705	-	4999599..5000468 (+)	870	WP_065212327.1	DUF421 domain-containing protein	-
JM957_RS25710	clpP	5000709..5001290 (+)	582	WP_001049162.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
JM957_RS25715	-	5001687..5001935 (-)	249	WP_000250307.1	HPr family phosphocarrier protein	-
JM957_RS25720	whiA	5001959..5002909 (-)	951	WP_000006558.1	DNA-binding protein WhiA	-
JM957_RS25725	-	5002998..5003951 (-)	954	WP_000712188.1	YvcK family protein	-
JM957_RS25730	rapZ	5003955..5004836 (-)	882	WP_000138459.1	RNase adapter RapZ	-
JM957_RS25735	-	5004857..5005315 (-)	459	WP_001190080.1	8-oxo-dGTP diphosphatase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21419.67 Da
• Isoelectric Point: 5.0423

>NTDB_id=530766 JM957_RS25710 WP_001049162.1 5000709..5001290(+) (clpP) [Bacillus cereus strain AFA01]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR

Nucleotide

• Length: 582 bp

>NTDB_id=530766 JM957_RS25710 WP_001049162.1 5000709..5001290(+) (clpP) [Bacillus cereus strain AFA01]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCGGGTATGGCAATCTATGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTACGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACTGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	90.104	99.482	0.896
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.021	97.409	0.653
clpP	Streptococcus thermophilus LMG 18311	60.417	99.482	0.601
clpP	Streptococcus thermophilus LMD-9	60.417	99.482	0.601
clpP	Lactococcus lactis subsp. cremoris KW2	58.854	99.482	0.585
clpP	Streptococcus pneumoniae D39	57.292	99.482	0.57
clpP	Streptococcus pneumoniae Rx1	57.292	99.482	0.57
clpP	Streptococcus pneumoniae R6	57.292	99.482	0.57
clpP	Streptococcus pneumoniae TIGR4	57.292	99.482	0.57
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	56.771	99.482	0.565
clpP	Streptococcus pyogenes JRS4	55.729	99.482	0.554
clpP	Streptococcus pyogenes MGAS315	55.729	99.482	0.554
clpP	Streptococcus mutans UA159	55.44	100	0.554