NTDB

Overview

Name	clpP	Type	Regulator
Locus tag	JKL50_RS15530	Genome accession	NZ_CP068389
Coordinates	3022029..3022625 (-)	Length	198 a.a.
NCBI ID	WP_007500118.1	Uniprot ID	-
Organism	Bacillus altitudinis strain ws31
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3017029..3027625

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JKL50_RS15505 (JKL50_15505)	-	3017105..3018082 (-)	978	WP_026050151.1	2-hydroxyacid dehydrogenase	-
JKL50_RS15510 (JKL50_15510)	-	3018646..3019227 (+)	582	WP_017357909.1	beta-class carbonic anhydrase	-
JKL50_RS15515 (JKL50_15515)	-	3019265..3020887 (+)	1623	WP_060832675.1	SulP family inorganic anion transporter	-
JKL50_RS15520 (JKL50_15520)	-	3020917..3021258 (-)	342	WP_017368102.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
JKL50_RS15525 (JKL50_15525)	-	3021395..3021973 (+)	579	WP_017368101.1	TIGR00730 family Rossman fold protein	-
JKL50_RS15530 (JKL50_15530)	clpP	3022029..3022625 (-)	597	WP_007500118.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
JKL50_RS15540 (JKL50_15540)	-	3023257..3023721 (+)	465	WP_073412777.1	DinB family protein	-
JKL50_RS15545 (JKL50_15545)	-	3023968..3024858 (+)	891	WP_234922864.1	ABC transporter substrate-binding protein	-
JKL50_RS15550 (JKL50_15550)	-	3025026..3026195 (+)	1170	WP_202734200.1	macrolide family glycosyltransferase	-

Sequence

Protein

Download Length: 198 a.a. Molecular weight: 21846.03 Da Isoelectric Point: 4.6905

                                >NTDB_id=528853 JKL50_RS15530 WP_007500118.1 3022029..3022625(-) (clpP) [Bacillus altitudinis strain ws31]

MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT

MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ

PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEEQK

Nucleotide

Download Length: 597 bp

                                >NTDB_id=528853 JKL50_RS15530 WP_007500118.1 3022029..3022625(-) (clpP) [Bacillus altitudinis strain ws31]

ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA

CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTATCACAGCTTCTCTTCTTAGAAGCCG

AGGATCCAGAAAAAGATATCTCTATCTACATTAACAGCCCTGGCGGTTCGATCACAGCTGGTATGGCCATTTATGATACG

ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG

TGAAAAAGGTAAGCGTTATGCCCTTCCAAATAGTGAAGTGATGATTCACCAACCACTAGGTGGTGCGCAAGGTCAAGCAA

CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG

CCAATTGAAGTCATTGAGCGTGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA

CAAAGTCTTGACCCGTAATACAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

Clp protease (CLP_protease)

(13-192)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.434	100	0.934
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53

Detailed information NTG0528853