Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   I6I87_RS03790 Genome accession   NZ_CP068109
Coordinates   825535..826074 (+) Length   179 a.a.
NCBI ID   WP_201665972.1    Uniprot ID   -
Organism   Moraxella osloensis strain FDAARGOS_1130     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 820535..831074
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I87_RS03780 (I6I87_03780) - 824139..824708 (+) 570 WP_320407563.1 type IV pilin protein -
  I6I87_RS03785 (I6I87_03785) - 824708..825154 (+) 447 WP_201665970.1 type IV pilin protein -
  I6I87_RS03790 (I6I87_03790) pilE 825535..826074 (+) 540 WP_201665972.1 pilin Machinery gene
  I6I87_RS03795 (I6I87_03795) - 826285..826830 (+) 546 WP_201665974.1 pilin -
  I6I87_RS03800 (I6I87_03800) tfpZ 826855..827637 (+) 783 WP_320407564.1 TfpX/TfpZ family type IV pilin accessory protein -
  I6I87_RS03805 (I6I87_03805) - 827723..829522 (+) 1800 WP_201665976.1 PglL family O-oligosaccharyltransferase -
  I6I87_RS03810 (I6I87_03810) - 829522..830787 (+) 1266 WP_201665978.1 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase -

Sequence

Protein


Download         Length: 179 a.a.        Molecular weight: 18245.66 Da        Isoelectric Point: 7.7777

>NTDB_id=527165 I6I87_RS03790 WP_201665972.1 825535..826074(+) (pilE) [Moraxella osloensis strain FDAARGOS_1130]
MNAQKGFTLIELMIVIAIIGILAAIALPAYQDYTVRTRVTEGLNLADSAKKVIANEGAATIGDLGRVADTWNGQAANTGA
NSKYVNSVLINRTNGLITVTYNPTSVGLAATENTLTLTPWIRSGAAGAGESLTDAIAAGRTGTVDWGCASNTNATATASG
ITVLAAGTLQAKYAPASCR

Nucleotide


Download         Length: 540 bp        

>NTDB_id=527165 I6I87_RS03790 WP_201665972.1 825535..826074(+) (pilE) [Moraxella osloensis strain FDAARGOS_1130]
ATGAACGCTCAAAAAGGTTTTACCCTTATCGAATTAATGATTGTTATCGCGATTATCGGTATTTTGGCTGCGATCGCACT
ACCTGCATACCAAGACTACACTGTACGTACACGTGTAACAGAAGGTCTAAACCTAGCTGATTCTGCGAAAAAAGTAATCG
CTAACGAAGGTGCGGCGACAATCGGTGATTTAGGTCGTGTAGCTGATACTTGGAACGGTCAAGCAGCTAATACTGGTGCT
AACTCAAAATATGTTAACTCAGTTTTAATTAATCGTACTAATGGTCTTATCACGGTAACTTACAATCCAACGTCTGTTGG
TTTAGCAGCTACAGAAAACACCTTGACTTTAACCCCATGGATTCGTAGTGGGGCTGCAGGAGCTGGTGAGTCATTAACAG
ATGCTATCGCTGCTGGTCGTACTGGTACTGTAGATTGGGGCTGTGCTTCTAATACAAATGCGACAGCGACTGCTAGTGGT
ATTACTGTTTTGGCAGCAGGTACATTACAAGCTAAATATGCACCAGCATCATGCCGTTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(1-27)

Pilin (bacterial filament) (Pilin)

(35-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Neisseria elongata subsp. glycolytica ATCC 29315

42.157

100

0.48
  pilA Ralstonia pseudosolanacearum GMI1000

44.199

100

0.447
  pilA2 Legionella pneumophila strain ERS1305867

42.935

100

0.441
  pilA2 Legionella pneumophila str. Paris

42.308

100

0.43
  comP Acinetobacter baylyi ADP1

37.297

100

0.385
  pilA/pilA1 Eikenella corrodens VA1

36.517

99.441

0.363
  pilA/pilAI Pseudomonas stutzeri DSM 10701

37.143

97.765

0.363