Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6J12_RS07400 Genome accession   NZ_CP068060
Coordinates   1555221..1557200 (-) Length   659 a.a.
NCBI ID   WP_003035474.1    Uniprot ID   I0SFG6
Organism   Streptococcus anginosus strain FDAARGOS_1155     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1550221..1562200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J12_RS07380 (I6J12_07380) amiF 1550412..1551335 (-) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  I6J12_RS07385 (I6J12_07385) amiE 1551346..1552413 (-) 1068 WP_003035549.1 ABC transporter ATP-binding protein Regulator
  I6J12_RS07390 (I6J12_07390) amiD 1552422..1553348 (-) 927 WP_003035531.1 oligopeptide ABC transporter permease OppC Regulator
  I6J12_RS07395 (I6J12_07395) amiC 1553348..1554844 (-) 1497 WP_003035572.1 ABC transporter permease Regulator
  I6J12_RS07400 (I6J12_07400) amiA3 1555221..1557200 (-) 1980 WP_003035474.1 peptide ABC transporter substrate-binding protein Regulator
  I6J12_RS07405 (I6J12_07405) amiA3 1557396..1559372 (-) 1977 WP_003035484.1 peptide ABC transporter substrate-binding protein Regulator
  I6J12_RS07410 (I6J12_07410) - 1559537..1560220 (-) 684 WP_025271647.1 B3/4 domain-containing protein -
  I6J12_RS07415 (I6J12_07415) - 1560454..1562064 (-) 1611 WP_003035551.1 CTP synthase -

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 73236.79 Da        Isoelectric Point: 7.8685

>NTDB_id=526809 I6J12_RS07400 WP_003035474.1 1555221..1557200(-) (amiA3) [Streptococcus anginosus strain FDAARGOS_1155]
MKKSKIITLAALALLATGALAACSSSKTSSGNKTFSYIYEQDPDNLNYLTTGKAATANLTSNVIDGLLENDRYGNLVPSV
AKDWTVSKDGLTYTYTLRKGVKWYTSEGEEYAEVKAQDFVTGLKYATDNKSDAIYLVQDSVKGLDAYMKGENKDFSSVGI
KAVDDYTVQYTLNRPESFWNSKTTMGVLAPVNAEFLKSKGNKFAQATDPSSLLYNGPYLLKSITAKSSVEFAKNPNYWDK
KNVHIDNIKLSYYDGQDQDKLAKGFSDGSFTNAKVFPTSPSYASVSKKYKNNIVYTPQDATTYLVATNIDRQSYNHTSKT
TDAQKTSTKKALLNKDFRQAITFAFDRTAYASQVNGKDGATKMLRNLFVPPTFVQTDDKSFGELVKEKLIGYDESWKDVN
LNDAQDGLYNPTKAKEKLAKAKAALQADGVQFPIHIDMPVDQTATNKVQRVQSLKQSIEKNLGKENVVIDIQQMSKDDVN
NITYFAESAAAEDWDLSDNVGWSPDFQDPSTYLDVIKPSSGESTKTYLGFDAGTNNAAAAQVGMNEYEKLLNEAEKETNN
TNARYEKYAAAQAWLTDNALVIPTTTLTGRPILSRTVPFSNAFAWSGNKGNSETILYKYLEIQDEPVTQNQYKKAMEKWN
KKRTESNKKAQEELANHVK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=526809 I6J12_RS07400 WP_003035474.1 1555221..1557200(-) (amiA3) [Streptococcus anginosus strain FDAARGOS_1155]
ATGAAGAAAAGTAAAATCATTACCCTTGCAGCGCTAGCCTTGCTTGCAACAGGAGCTCTAGCAGCTTGTTCTAGCTCTAA
AACAAGCTCGGGGAACAAAACATTCTCATATATTTATGAGCAAGATCCAGATAACCTGAACTATTTGACAACTGGGAAAG
CAGCTACTGCAAATCTTACCAGTAATGTCATTGACGGACTCTTGGAAAATGACCGTTACGGAAATCTAGTTCCTTCTGTA
GCGAAGGATTGGACAGTCTCCAAGGATGGCTTGACTTATACTTATACACTTCGTAAGGGTGTGAAATGGTACACATCAGA
GGGTGAAGAGTATGCAGAAGTTAAGGCACAAGACTTTGTGACAGGCTTAAAATATGCTACGGATAATAAATCTGATGCTA
TTTACTTGGTGCAAGATTCTGTTAAAGGCTTGGATGCTTACATGAAGGGTGAAAATAAAGATTTCTCTTCTGTCGGTATC
AAAGCAGTTGATGATTACACGGTTCAATACACGCTTAATCGACCAGAAAGCTTTTGGAATTCTAAAACAACAATGGGCGT
TCTAGCACCAGTTAATGCAGAATTTTTGAAATCAAAAGGCAATAAATTTGCACAAGCAACAGACCCATCTAGTCTTCTTT
ATAATGGTCCATACTTGCTGAAATCTATCACAGCGAAATCGTCTGTTGAATTTGCTAAAAATCCAAACTACTGGGATAAG
AAAAATGTGCACATTGACAACATCAAGCTGTCTTACTATGATGGTCAAGACCAAGACAAACTTGCTAAAGGATTTAGTGA
TGGCTCATTTACCAATGCTAAAGTATTTCCAACTAGCCCAAGTTATGCTTCTGTCAGCAAGAAATACAAAAACAACATCG
TTTATACTCCACAAGATGCAACAACTTACTTAGTAGCTACAAATATTGATCGTCAATCTTACAATCACACTTCAAAGACA
ACAGATGCTCAAAAAACTTCTACTAAGAAAGCTTTGCTAAACAAGGATTTCCGTCAAGCGATTACCTTTGCATTTGACCG
CACTGCTTATGCATCACAGGTGAATGGTAAAGACGGTGCGACGAAGATGCTCCGTAATCTCTTTGTACCACCAACGTTTG
TTCAAACAGATGACAAGAGCTTTGGAGAATTGGTCAAAGAAAAATTGATTGGCTACGATGAAAGTTGGAAAGATGTCAAC
TTAAATGATGCGCAAGATGGGCTTTATAATCCAACTAAAGCTAAAGAAAAATTAGCGAAAGCGAAAGCAGCGCTTCAAGC
AGATGGCGTTCAATTCCCAATCCACATTGATATGCCAGTTGACCAAACAGCAACTAATAAAGTTCAACGTGTGCAATCAT
TGAAACAATCTATTGAAAAAAATCTTGGGAAAGAAAATGTTGTGATTGATATTCAACAAATGTCTAAAGACGACGTGAAT
AATATCACTTACTTTGCCGAATCCGCAGCGGCAGAAGATTGGGATCTTTCTGATAATGTTGGTTGGAGTCCAGACTTCCA
AGACCCATCTACCTATCTTGATGTTATCAAACCTTCAAGCGGTGAAAGCACTAAGACCTATCTAGGATTTGATGCAGGCA
CGAACAACGCTGCTGCAGCACAAGTTGGTATGAACGAATATGAAAAGTTGTTGAATGAGGCTGAAAAAGAAACCAACAAT
ACGAATGCACGCTATGAAAAATATGCTGCAGCCCAAGCTTGGTTGACTGATAATGCATTGGTCATTCCAACAACAACACT
AACGGGTCGCCCAATTCTTTCTCGTACAGTACCATTTAGTAATGCCTTTGCTTGGTCAGGAAACAAGGGAAATAGTGAAA
CAATTCTCTATAAATACCTTGAAATCCAAGATGAGCCTGTGACTCAAAATCAATACAAGAAGGCAATGGAAAAATGGAAT
AAAAAGCGCACAGAGTCTAATAAAAAGGCTCAAGAAGAACTTGCAAATCATGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SFG6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

60.909

100

0.61
  amiA3 Streptococcus thermophilus LMG 18311

60.303

100

0.604
  amiA Streptococcus salivarius strain HSISS4

59.848

100

0.599