Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   I6J12_RS07385 Genome accession   NZ_CP068060
Coordinates   1551346..1552413 (-) Length   355 a.a.
NCBI ID   WP_003035549.1    Uniprot ID   I0SFL2
Organism   Streptococcus anginosus strain FDAARGOS_1155     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1546346..1557413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J12_RS07365 (I6J12_07365) - 1546926..1548383 (+) 1458 WP_003035449.1 sucrose-6-phosphate hydrolase -
  I6J12_RS07370 (I6J12_07370) - 1548364..1549329 (+) 966 WP_003035453.1 LacI family DNA-binding transcriptional regulator -
  I6J12_RS07375 (I6J12_07375) - 1549402..1550226 (-) 825 WP_003035518.1 Cof-type HAD-IIB family hydrolase -
  I6J12_RS07380 (I6J12_07380) amiF 1550412..1551335 (-) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  I6J12_RS07385 (I6J12_07385) amiE 1551346..1552413 (-) 1068 WP_003035549.1 ABC transporter ATP-binding protein Regulator
  I6J12_RS07390 (I6J12_07390) amiD 1552422..1553348 (-) 927 WP_003035531.1 oligopeptide ABC transporter permease OppC Regulator
  I6J12_RS07395 (I6J12_07395) amiC 1553348..1554844 (-) 1497 WP_003035572.1 ABC transporter permease Regulator
  I6J12_RS07400 (I6J12_07400) amiA3 1555221..1557200 (-) 1980 WP_003035474.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39769.47 Da        Isoelectric Point: 4.6920

>NTDB_id=526806 I6J12_RS07385 WP_003035549.1 1551346..1552413(-) (amiE) [Streptococcus anginosus strain FDAARGOS_1155]
MTQEKNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEENGRVAQGTIDYRGQDL
TKLKSNKDWEPIRGVKIATIFQDPMTSLDPINTIGSQITEVIIKHQKKTPKEAKEMAVDYMNKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKYLQQEYEFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYSHLQGDAFALRSDYAMEIDFEEKPPQIYVTDTHWAK
TWLLHENAPKVNKPAVIDDLHEKISSKMGFAHLDA

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=526806 I6J12_RS07385 WP_003035549.1 1551346..1552413(-) (amiE) [Streptococcus anginosus strain FDAARGOS_1155]
ATGACACAAGAAAAAAATGTAATATTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGATAAAGTCTTAACAGC
CATTCGTGGTGTTTCGCTTGACCTTATCGAAGGTGAGGTTCTTGCACTTGTAGGAGAATCTGGTTCTGGTAAGTCTGTTT
TGACAAAGACATTTACAGGAATGTTAGAGGAAAATGGTCGAGTTGCTCAAGGAACGATTGATTACCGTGGACAAGATTTG
ACAAAATTGAAGTCTAATAAAGATTGGGAACCTATACGCGGTGTTAAAATTGCAACAATCTTCCAAGATCCGATGACGAG
TTTGGACCCTATTAACACAATTGGTAGCCAAATTACAGAAGTGATTATCAAGCATCAAAAGAAAACGCCAAAAGAAGCAA
AAGAAATGGCTGTTGACTATATGAATAAGGTCGGCATTCCTGATGCTGAAAAGCGTTTTAATGAATACCCATTCCAATAT
TCAGGAGGAATGCGTCAACGGATTGTTATCGCTATTGCGCTTGCTTGTCGCCCTGATATCCTTATCTGTGATGAACCAAC
GACAGCGCTTGACGTTACGATTCAGGCACAAATCATTGATTTGTTGAAATATTTGCAGCAAGAATATGAATTTACAACTA
TTTTTATCACCCACGACCTGGGAGTGGTAGCAAGTATTGCAGATAAGGTTGCGGTTATGTATGCTGGTGAAATCGTTGAA
TACGGAACAGTAGAAGAAGTCTTTTACGATCCACGTCATCCTTACACTTGGAGTTTGTTATCTAGTCTGCCTCAGTTGGC
AGATGATAAGGGTGAGTTGTATTCAATTCCTGGAACGCCGCCATCTCTTTATTCACATTTACAAGGAGATGCATTTGCCT
TGCGTTCAGATTATGCTATGGAAATTGATTTTGAAGAGAAGCCACCTCAAATATATGTAACGGATACCCACTGGGCAAAA
ACATGGTTGTTACATGAGAATGCTCCAAAAGTGAATAAGCCAGCTGTTATTGATGATTTACACGAAAAAATTAGCTCAAA
AATGGGCTTTGCCCATTTAGACGCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0SFL2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

85.836

99.437

0.854

  amiE Streptococcus thermophilus LMG 18311

84.419

99.437

0.839

  amiE Streptococcus thermophilus LMD-9

84.419

99.437

0.839

  oppD Streptococcus mutans UA159

56.215

99.718

0.561