Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   I6J12_RS07395 Genome accession   NZ_CP068060
Coordinates   1553348..1554844 (-) Length   498 a.a.
NCBI ID   WP_003035572.1    Uniprot ID   I0SFM4
Organism   Streptococcus anginosus strain FDAARGOS_1155     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1548348..1559844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J12_RS07370 (I6J12_07370) - 1548364..1549329 (+) 966 WP_003035453.1 LacI family DNA-binding transcriptional regulator -
  I6J12_RS07375 (I6J12_07375) - 1549402..1550226 (-) 825 WP_003035518.1 Cof-type HAD-IIB family hydrolase -
  I6J12_RS07380 (I6J12_07380) amiF 1550412..1551335 (-) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  I6J12_RS07385 (I6J12_07385) amiE 1551346..1552413 (-) 1068 WP_003035549.1 ABC transporter ATP-binding protein Regulator
  I6J12_RS07390 (I6J12_07390) amiD 1552422..1553348 (-) 927 WP_003035531.1 oligopeptide ABC transporter permease OppC Regulator
  I6J12_RS07395 (I6J12_07395) amiC 1553348..1554844 (-) 1497 WP_003035572.1 ABC transporter permease Regulator
  I6J12_RS07400 (I6J12_07400) amiA3 1555221..1557200 (-) 1980 WP_003035474.1 peptide ABC transporter substrate-binding protein Regulator
  I6J12_RS07405 (I6J12_07405) amiA3 1557396..1559372 (-) 1977 WP_003035484.1 peptide ABC transporter substrate-binding protein Regulator

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55818.98 Da        Isoelectric Point: 10.0752

>NTDB_id=526808 I6J12_RS07395 WP_003035572.1 1553348..1554844(-) (amiC) [Streptococcus anginosus strain FDAARGOS_1155]
MKKYIFMRILRSLVSIFMVTTLTYTIIYTMVPRKLIFKQDPNYNKIATTPDKKTNYENTIFERMGYIDYYDTKELQEKAS
KENSSVTVEPTNANKKIYEAYIKKLGRGWKLQQFKESKQFYATREVPVYERVLGFYGNLIQIDHTGAVKDASNPNLKRYI
RIENDPAIGWSVVGSGTKHKYLLYFNSQFPFIHQNFVRLNLGTSYPTYANLPVLQVISQGQGQTKTSEVQFPTGKKTSSV
NIYTRTYKSPKQADARDVANYGKDDPYTATESNYQYPSMIVSSSIVGLIGLALSYLIAVPLGSYMARFKNTLFDSISTGA
LTFLMSLPTIALVYIIRLIGSAIGLPDSFPILGAGDWRSYVLPAVILGLLSAPWTAVWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSSIPGAIIGVITGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCLSIFALLLGD
ILMTVLDPRIKLTSKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=526808 I6J12_RS07395 WP_003035572.1 1553348..1554844(-) (amiC) [Streptococcus anginosus strain FDAARGOS_1155]
ATGAAGAAATATATTTTTATGCGTATCTTACGCTCTTTAGTATCTATTTTCATGGTAACAACGCTGACTTACACCATTAT
CTATACCATGGTGCCTAGGAAGTTGATTTTCAAACAGGATCCAAACTATAACAAAATAGCAACAACTCCTGATAAAAAGA
CCAATTACGAAAATACGATTTTTGAGCGCATGGGTTACATTGACTACTATGATACGAAGGAATTGCAAGAAAAAGCTAGT
AAAGAGAATTCCTCTGTAACAGTAGAACCTACTAATGCAAATAAAAAAATCTATGAAGCTTACATCAAAAAGCTGGGACG
CGGTTGGAAATTGCAGCAATTTAAAGAAAGCAAGCAATTTTATGCAACTCGTGAAGTTCCAGTCTATGAACGCGTTCTTG
GTTTCTATGGTAATTTGATTCAAATTGACCATACAGGTGCTGTGAAAGATGCTTCTAATCCGAATTTGAAGCGTTATATT
CGCATTGAAAATGATCCTGCTATTGGTTGGTCTGTTGTTGGTTCTGGAACGAAACATAAATATTTATTATATTTCAATAG
TCAGTTTCCATTTATCCACCAAAATTTTGTAAGATTAAATCTAGGAACTTCTTATCCGACCTATGCTAATCTTCCTGTTT
TACAGGTTATTTCACAAGGGCAAGGTCAAACGAAGACATCAGAAGTTCAATTTCCAACAGGAAAGAAAACATCATCTGTT
AATATTTATACACGTACATATAAGTCTCCAAAGCAAGCCGATGCACGCGATGTTGCTAATTACGGAAAAGATGATCCTTA
TACGGCGACAGAGAGCAATTATCAATATCCATCTATGATTGTGAGCTCTTCTATTGTTGGGTTGATTGGTTTGGCCTTGT
CATACTTAATCGCCGTTCCACTTGGATCTTATATGGCTCGCTTTAAGAATACATTGTTTGATAGTATTTCAACCGGTGCT
TTGACTTTCTTAATGTCACTGCCAACTATTGCCTTGGTTTATATCATTCGCTTGATTGGTTCAGCGATTGGCTTACCTGA
TTCATTCCCTATTTTGGGAGCAGGTGATTGGCGCTCTTATGTGTTGCCGGCAGTTATTCTTGGACTCTTGAGTGCGCCTT
GGACAGCAGTGTGGATTCGCCGTTATATGATTGACTTGCAATCACAAGATTTTGTTCGTTTTGCACGTGCAAAAGGTCTT
TCTGAAAAAGAAATTTCTAATAAACATATTTTCAAAAATGCTATGGTGCCACTTGTATCCAGTATACCTGGTGCTATTAT
CGGAGTTATCACAGGTGCAACTTTGACTGAAACAGTCTTTGCTTTCCCTGGTATGGGTAAGATGTTGATTGACTCTGTTA
AAGCTTCAAACAATTCTATGGTCGTTGGTCTTGTCTTTATCTTTACTTGTCTTTCTATCTTCGCTCTTCTATTGGGTGAT
ATTCTGATGACAGTACTTGACCCACGTATTAAATTAACATCAAAAGGAGGTAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SFM4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

80.321

100

0.803
  amiC Streptococcus thermophilus LMG 18311

79.92

100

0.799
  amiC Streptococcus thermophilus LMD-9

79.719

100

0.797