Detailed information NTG0526128

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: JJN14_RS00635
• Genome accession: NZ_CP067992
• Coordinates: 154015..154476 (+)
• Length: 153 a.a.
• NCBI ID: WP_201058647.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain S022-V7-A3
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 149015..159476

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JJN14_RS00600 (JJN14_00600)	-	149507..150565 (+)	1059	WP_201058643.1	zinc-dependent alcohol dehydrogenase family protein	-
JJN14_RS00605 (JJN14_00605)	-	150715..151080 (+)	366	WP_033688032.1	DUF1033 family protein	-
JJN14_RS00610 (JJN14_00610)	comGA/cglA/cilD	151157..152098 (+)	942	WP_201058644.1	competence type IV pilus ATPase ComGA	Machinery gene
JJN14_RS00615 (JJN14_00615)	comGB/cglB	152046..153062 (+)	1017	WP_201059119.1	competence type IV pilus assembly protein ComGB	Machinery gene
JJN14_RS00620 (JJN14_00620)	comGC/cglC	153064..153390 (+)	327	WP_201058645.1	comG operon protein ComGC	Machinery gene
JJN14_RS00625 (JJN14_00625)	comGD/cglD	153383..153787 (+)	405	WP_265342534.1	competence type IV pilus minor pilin ComGD	Machinery gene
JJN14_RS00630 (JJN14_00630)	comGE/cglE	153750..154052 (+)	303	WP_255262223.1	competence type IV pilus minor pilin ComGE	Machinery gene
JJN14_RS00635 (JJN14_00635)	comGF/cglF	154015..154476 (+)	462	WP_201058647.1	competence type IV pilus minor pilin ComGF	Machinery gene
JJN14_RS00640 (JJN14_00640)	comGG/cglG	154454..154867 (+)	414	WP_201058648.1	competence type IV pilus minor pilin ComGG	Machinery gene
JJN14_RS00645 (JJN14_00645)	-	154900..155487 (+)	588	Protein_122	class I SAM-dependent methyltransferase	-
JJN14_RS00650 (JJN14_00650)	comYH	155548..156501 (+)	954	WP_201058649.1	class I SAM-dependent methyltransferase	Machinery gene
JJN14_RS00655 (JJN14_00655)	-	156551..157741 (+)	1191	WP_201058650.1	acetate kinase	-
JJN14_RS00660 (JJN14_00660)	rnpA	157890..158261 (+)	372	WP_201058651.1	ribonuclease P protein component	-
JJN14_RS00665 (JJN14_00665)	-	158236..159060 (+)	825	WP_201058652.1	membrane protein insertase YidC	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17880.56 Da
• Isoelectric Point: 8.8122

>NTDB_id=526128 JJN14_RS00635 WP_201058647.1 154015..154476(+) (comGF/cglF) [Streptococcus mitis strain S022-V7-A3]
MVQNSCWLSKSHKIKAFTLLESLIVLIVISGSLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RIYMKQDGKEIAISKSNSDDFRKTDASGRGYQPMVYGLKSAQIIEDNQLVRFRFQFQKGLEREFIYRVEKAKS

Nucleotide

• Length: 462 bp

>NTDB_id=526128 JJN14_RS00635 WP_201058647.1 154015..154476(+) (comGF/cglF) [Streptococcus mitis strain S022-V7-A3]
ATGGTTCAGAACAGTTGTTGGCTATCAAAGAGCCATAAGATCAAGGCTTTTACCCTGTTAGAATCGCTGATTGTCCTTAT
TGTCATCAGTGGAAGCTTACTTCTCTTTCAAGCCATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAGCAAAGTG
AGCAAAAAGAGTGGCTCTTGTTTGTAGACCAGCTGGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCATTTATATGAAGCAGGATGGCAAGGAAATCGCCATCAGTAAGTCCAATTCGGACGATTTTCGGAAAACCGATGCCAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTATAGAGGATAATCAACTGGTTCGTTTTCGTT
TCCAGTTTCAAAAAGGATTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGCAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	95.425	100	0.954
comGF/cglF	Streptococcus mitis SK321	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae Rx1	88.889	100	0.889
comGF/cglF	Streptococcus pneumoniae D39	88.889	100	0.889
comGF/cglF	Streptococcus pneumoniae R6	88.889	100	0.889
comGF/cglF	Streptococcus pneumoniae TIGR4	88.889	100	0.889