Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG/cglG   Type   Machinery gene
Locus tag   JJN14_RS00640 Genome accession   NZ_CP067992
Coordinates   154454..154867 (+) Length   137 a.a.
NCBI ID   WP_201058648.1    Uniprot ID   -
Organism   Streptococcus mitis strain S022-V7-A3     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 149454..159867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS00600 (JJN14_00600) - 149507..150565 (+) 1059 WP_201058643.1 zinc-dependent alcohol dehydrogenase family protein -
  JJN14_RS00605 (JJN14_00605) - 150715..151080 (+) 366 WP_033688032.1 DUF1033 family protein -
  JJN14_RS00610 (JJN14_00610) comGA/cglA/cilD 151157..152098 (+) 942 WP_201058644.1 competence type IV pilus ATPase ComGA Machinery gene
  JJN14_RS00615 (JJN14_00615) comGB/cglB 152046..153062 (+) 1017 WP_201059119.1 competence type IV pilus assembly protein ComGB Machinery gene
  JJN14_RS00620 (JJN14_00620) comGC/cglC 153064..153390 (+) 327 WP_201058645.1 comG operon protein ComGC Machinery gene
  JJN14_RS00625 (JJN14_00625) comGD/cglD 153383..153787 (+) 405 WP_265342534.1 competence type IV pilus minor pilin ComGD Machinery gene
  JJN14_RS00630 (JJN14_00630) comGE/cglE 153750..154052 (+) 303 WP_255262223.1 competence type IV pilus minor pilin ComGE Machinery gene
  JJN14_RS00635 (JJN14_00635) comGF/cglF 154015..154476 (+) 462 WP_201058647.1 competence type IV pilus minor pilin ComGF Machinery gene
  JJN14_RS00640 (JJN14_00640) comGG/cglG 154454..154867 (+) 414 WP_201058648.1 competence type IV pilus minor pilin ComGG Machinery gene
  JJN14_RS00645 (JJN14_00645) - 154900..155487 (+) 588 Protein_122 class I SAM-dependent methyltransferase -
  JJN14_RS00650 (JJN14_00650) comYH 155548..156501 (+) 954 WP_201058649.1 class I SAM-dependent methyltransferase Machinery gene
  JJN14_RS00655 (JJN14_00655) - 156551..157741 (+) 1191 WP_201058650.1 acetate kinase -
  JJN14_RS00660 (JJN14_00660) rnpA 157890..158261 (+) 372 WP_201058651.1 ribonuclease P protein component -
  JJN14_RS00665 (JJN14_00665) - 158236..159060 (+) 825 WP_201058652.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 137 a.a.        Molecular weight: 15875.30 Da        Isoelectric Point: 10.2021

>NTDB_id=526129 JJN14_RS00640 WP_201058648.1 154454..154867(+) (comGG/cglG) [Streptococcus mitis strain S022-V7-A3]
MWKKQKVKAGVLLYAVIMAAIFSLLLQFYLNRQVAHYQDYALNKEKLIAFAMAKRTKDKVEQESGEQVFNLGQVSYQNKK
TSLVTTVRTPKSQYEFLFPSVKIKEEKTDKKEQVVTDSSNQAEKKKSEEKSEKKENS

Nucleotide


Download         Length: 414 bp        

>NTDB_id=526129 JJN14_RS00640 WP_201058648.1 154454..154867(+) (comGG/cglG) [Streptococcus mitis strain S022-V7-A3]
GTGTGGAAAAAGCAAAAAGTTAAGGCAGGAGTTCTCCTTTATGCAGTCATCATGGCAGCCATTTTTAGCCTTTTGTTACA
ATTTTACTTGAACAGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAGTTAATCGCTTTTGCTATGGCCA
AACGAACCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGTCTTTAACCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACAAGCTTAGTGACGACGGTTCGTACGCCTAAGAGCCAATATGAGTTCCTATTTCCTTCAGTCAAAATCAAAGAAGAGAA
AACGGATAAAAAGGAACAGGTAGTGACTGATTCAAGTAATCAAGCGGAAAAGAAAAAATCAGAAGAGAAGTCTGAAAAGA
AAGAGAATTCCTAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis SK321

91.971

100

0.92

  comGG/cglG Streptococcus mitis NCTC 12261

95.082

89.051

0.847

  comGG/cglG Streptococcus pneumoniae Rx1

90.598

85.401

0.774

  comGG/cglG Streptococcus pneumoniae D39

90.598

85.401

0.774

  comGG/cglG Streptococcus pneumoniae R6

90.598

85.401

0.774

  comGG/cglG Streptococcus pneumoniae TIGR4

90.598

85.401

0.774